DRSC/TRiP Functional Genomics Resources

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Protein Alignment Gcat and SPTLC3

DIOPT Version :10

Sequence 1:NP_648509.1 Gene:Gcat / 39333 FlyBaseID:FBgn0036208 Length:417 Species:Drosophila melanogaster
Sequence 2:NP_060797.2 Gene:SPTLC3 / 55304 HGNCID:16253 Length:552 Species:Homo sapiens


Alignment Length:375 Identity:127/375 - (33%)
Similarity:204/375 - (54%) Gaps:28/375 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly    64 KKILNFCANNYLGL-ANNPEIVEHSQKLLEQYGAGLSSVRFICGTQDIHKQLEKKIAQFHGREDT 127
            |.::|..:.|:||| |...|.:...:.:||.||.|::|.|...||.|.||:||..:|:|...|..
Human   160 KDVINMGSYNFLGLAAKYDESMRTIKDVLEVYGTGVASTRHEMGTLDKHKELEDLVAKFLNVEAA 224

  Fly   128 ILYASCFDANAGIFEAILTPEDAVFSDELNHASIIDGIRLCKAKKQRYRHRDLGDLEEQLKASDA 192
            :::...|..|:....|::.....:.||||||.|::.|.||..|..:.::|.:...||:.|:  ||
Human   225 MVFGMGFATNSMNIPALVGKGCLILSDELNHTSLVLGARLSGATIRIFKHNNTQSLEKLLR--DA 287

  Fly   193 ------------RLKLIATDGVFSMDGNIAPLARIVELARKYNALVFVDECHATGFFGATGRGTE 245
                        :..||..:||:||:|:|..|.:|:.|.:||.|.:::||.|:.|..|.||||..
Human   288 VIYGQPRTRRAWKKILILVEGVYSMEGSIVHLPQIIALKKKYKAYLYIDEAHSIGAVGPTGRGVT 352

  Fly   246 EYDNV-MGEVDIINSTLGKALGGASGGYTTGPAELISFLRQKSRPYLFSNTLPPAV---VAVGLK 306
            |:..: ..|||::..|..|:. ||||||..|..:|:.:||..|...::::::.|.:   :...||
Human   353 EFFGLDPHEVDVLMGTFTKSF-GASGGYIAGRKDLVDYLRVHSHSAVYASSMSPPIAEQIIRSLK 416

  Fly   307 V---MDMLLQSSELTQRVQSNTQRFRQAMTKAGFTIAG-ENHPICPVMLGDARLASQFADEMLTR 367
            :   :|...|..:..|::..||:.|||.:.:.||.|.| ||..:.|::|......:.||..||.:
Human   417 LIMGLDGTTQGLQRVQQLAKNTRYFRQRLQEMGFIIYGNENASVVPLLLYMPGKVAAFARHMLEK 481

  Fly   368 --GIYVIGFSYPVVPQGKARIRVQISAAHTEAEIDRAINAFIEVGRSLKV 415
              |:.|:||  |..|..:||.|..:|||||...:|..:.|..|:|..|::
Human   482 KIGVVVVGF--PATPLAEARARFCVSAAHTREMLDTVLEALDEMGDLLQL 529

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GcatNP_648509.1 PRK06939 19..416 CDD:235893 127/375 (34%)
SPTLC3NP_060797.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..29
AAT_I 57..549 CDD:450240 127/375 (34%)
Blue background indicates that the domain is not in the aligned region.

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