DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Gcat and gcat

DIOPT Version :10

Sequence 1:NP_648509.1 Gene:Gcat / 39333 FlyBaseID:FBgn0036208 Length:417 Species:Drosophila melanogaster
Sequence 2:NP_989284.1 Gene:gcat / 394899 XenbaseID:XB-GENE-984769 Length:415 Species:Xenopus tropicalis


Alignment Length:403 Identity:273/403 - (67%)
Similarity:326/403 - (80%) Gaps:3/403 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly    15 GRHYSAAAQAQLREILGTQLAGIKDAGTFKAERIITSSQSTQITVQGSDKKILNFCANNYLGLAN 79
            ||..||.  ||||.:|..:|..|:.|||:|:||||||.|...|.|:|.|..||||||||||||::
 Frog    14 GRGLSAV--AQLRGVLEKELEAIRGAGTWKSERIITSKQGPHIKVEGKDTGILNFCANNYLGLSS 76

  Fly    80 NPEIVEHSQKLLEQYGAGLSSVRFICGTQDIHKQLEKKIAQFHGREDTILYASCFDANAGIFEAI 144
            :|:::..:.:.||::||||||||||||||:|||.||:|||:||.|||.|||.||||||||||||:
 Frog    77 HPQVIRAACETLEEFGAGLSSVRFICGTQNIHKSLEQKIARFHQREDAILYISCFDANAGIFEAL 141

  Fly   145 LTPEDAVFSDELNHASIIDGIRLCKAKKQRYRHRDLGDLEEQLK-ASDARLKLIATDGVFSMDGN 208
            |:|||||.||||||||||||||||||.|.||:|.||.|||.:|| |...||:||||||||||||:
 Frog   142 LSPEDAVLSDELNHASIIDGIRLCKANKYRYKHMDLDDLEAKLKEAQKHRLRLIATDGVFSMDGD 206

  Fly   209 IAPLARIVELARKYNALVFVDECHATGFFGATGRGTEEYDNVMGEVDIINSTLGKALGGASGGYT 273
            ||||..|..||::||||||:||||||||.|..||||:|...||.:|.|:|||||||||||:||||
 Frog   207 IAPLREICSLAKRYNALVFIDECHATGFMGPNGRGTDELLGVMDQVTIVNSTLGKALGGAAGGYT 271

  Fly   274 TGPAELISFLRQKSRPYLFSNTLPPAVVAVGLKVMDMLLQSSELTQRVQSNTQRFRQAMTKAGFT 338
            |||..||..|||:|||||||||||||||....|.:|:|::|:|:.|.|.:.|:|||..||:||||
 Frog   272 TGPKPLIDLLRQRSRPYLFSNTLPPAVVGSASKALDLLMESNEIAQSVAAKTKRFRTKMTEAGFT 336

  Fly   339 IAGENHPICPVMLGDARLASQFADEMLTRGIYVIGFSYPVVPQGKARIRVQISAAHTEAEIDRAI 403
            |:|::|||||||||||||||..||::|.|||||||||:||||:||||||||||.||::.:||..:
 Frog   337 ISGKDHPICPVMLGDARLASLMADDLLQRGIYVIGFSFPVVPKGKARIRVQISTAHSDDDIDNCV 401

  Fly   404 NAFIEVGRSLKVI 416
            ..|.||||...||
 Frog   402 QMFTEVGRKHGVI 414

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GcatNP_648509.1 PRK06939 19..416 CDD:235893 269/397 (68%)
gcatNP_989284.1 AAT_I 23..414 CDD:450240 265/390 (68%)

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