DRSC/TRiP Functional Genomics Resources

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Protein Alignment Gcat and Alas2

DIOPT Version :10

Sequence 1:NP_648509.1 Gene:Gcat / 39333 FlyBaseID:FBgn0036208 Length:417 Species:Drosophila melanogaster
Sequence 2:XP_038955432.1 Gene:Alas2 / 25748 RGDID:2084 Length:593 Species:Rattus norvegicus


Alignment Length:361 Identity:130/361 - (36%)
Similarity:212/361 - (58%) Gaps:11/361 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly    64 KKILNFCANNYLGLANNPEIVEHSQKLLEQYGAGLSSVRFICGTQDIHKQLEKKIAQFHGREDTI 128
            |.:..:|:|:|||::.:|.:::..::.|:.:|||....|.|.||...|.:||:::|:.|.::..:
  Rat   195 KDVSVWCSNDYLGISRHPRVLQAIEETLKNHGAGAGGTRNISGTSKFHVELEQELAELHHKDSAL 259

  Fly   129 LYASCFDAN-AGIFE-AILTPEDAVFSDELNHASIIDGIRLCKAKKQRYRHRDLGDLEEQLKASD 191
            |::|||.|| :.:|. |.|.|...::||..||||:|.|||...|.|..:||.|.|.|::.|:.||
  Rat   260 LFSSCFVANDSTLFTLAKLLPGCEIYSDAGNHASMIQGIRNSGAVKFVFRHNDPGHLKKLLEKSD 324

  Fly   192 ARL-KLIATDGVFSMDGNIAPLARIVELARKYNALVFVDECHATGFFGATGRGTEEYDNVMGEVD 255
            .:. |::|.:.|.||||.|.||..:.::|.:|.||.||||.||.|.:|..|.|..|.|.:|.::|
  Rat   325 PKTPKIVAFETVHSMDGAICPLEELCDVAHQYGALTFVDEVHAVGLYGTRGAGIGERDGIMHKLD 389

  Fly   256 IINSTLGKALGGASGGYTTGPAELISFLRQKSRPYLFSNTLPPAVVAVGLKVMDMLL--QSSELT 318
            ||:.|||||. |..|||.....:|:..:|..:..::|:.:|||.|::..|:.:.:|.  :...|.
  Rat   390 IISGTLGKAF-GCVGGYIASTRDLVDMVRSYAAGFIFTTSLPPMVLSGALESVRLLKGEEGQALR 453

  Fly   319 QRVQSNTQRFRQAMTKAGFTIAGENHPICPVMLGDARLASQFADEMLTR-GIYVIGFSYPVVPQG 382
            :..|.|.:..||.:...||.:......|.|:.:|:|.|.|:..|.:|.: .|||...:||.||:|
  Rat   454 RAHQRNVKHMRQLLMDRGFPVIPCPSHIIPIRVGNAALNSKICDLLLAKHSIYVQAINYPTVPRG 518

  Fly   383 KARIRVQISAAHT----EAEIDRAINAFIEVGRSLK 414
            :..:|:..|..|:    |..:::.:.|:.|||..|:
  Rat   519 EELLRLAPSPHHSPQMMENFVEKLLLAWTEVGLPLQ 554

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GcatNP_648509.1 PRK06939 19..416 CDD:235893 130/361 (36%)
Alas2XP_038955432.1 Preseq_ALAS 5..100 CDD:462658
5aminolev_synth 149..554 CDD:273820 129/359 (36%)
Blue background indicates that the domain is not in the aligned region.

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