DRSC/TRiP Functional Genomics Resources

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Protein Alignment Gcat and Sptlc3

DIOPT Version :10

Sequence 1:NP_648509.1 Gene:Gcat / 39333 FlyBaseID:FBgn0036208 Length:417 Species:Drosophila melanogaster
Sequence 2:NP_780676.1 Gene:Sptlc3 / 228677 MGIID:2444678 Length:563 Species:Mus musculus


Alignment Length:380 Identity:122/380 - (32%)
Similarity:197/380 - (51%) Gaps:38/380 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly    64 KKILNFCANNYLGLANN-PEIVEHSQKLLEQYGAGLSSVRFICGTQDIHKQLEKKIAQFHGREDT 127
            :.|:|..:.||||||.. .:.:...:..||:||.|::|.|...||.||||:||..:|:|...|..
Mouse   160 ENIINMASYNYLGLAGKYDDSMVRVKDTLEKYGVGVASTRNEMGTLDIHKELEDLMAEFLNVEAV 224

  Fly   128 ILYASCFDANAGIFEAILTPEDAVFSDELNHASIIDGIRLCKAKKQRYRHRDLGDLEEQLKASDA 192
            :.:...|..||......:.....:.|||.||.|:|.|.||..|..:.::|.:..:||:.|:.:..
Mouse   225 MSFGMGFATNAMNIPVFVGKGCLILSDEFNHTSVILGSRLSGAVIRPFKHNNAENLEKLLREAII 289

  Fly   193 RLK----------LIATDGVFSMDGNIAPLARIVELARKYNALVFVDECHATGFFGATGRGTEEY 247
            |.:          ||..:||:||:|:|..||:||.|.:||.|.:::||.|:.|..|.||||..|.
Mouse   290 RGQPGTGRAWKKILIVVEGVYSMEGSIVNLAQIVALKKKYKAYLYIDEAHSIGCTGPTGRGVREL 354

  Fly   248 DNVMGE-VDIINSTLGKALGGASGGYTTGPAELISFLRQKSRPYLFSNTLPPAVVAVGLKVMDML 311
            ..:..| :|:...|..|:..| ||||..|..|::.:||.:|....::.::.|.|.|       .|
Mouse   355 FGLDPEDIDVYMGTFTKSFSG-SGGYIGGKKEIVDYLRMQSHSTTYATSMSPVVAA-------QL 411

  Fly   312 LQSSELT-------------QRVQSNTQRFRQAMTKAGFTIAGEN-HPICPVMLGDARLASQFAD 362
            ::|.::|             |:::.|.:.||:.:.:.||.|.|.: .|:.||:|......|.|:.
Mouse   412 IRSLKITMGYEGNIGGMERIQQLKENIKYFRRRLKEMGFIIYGNDFSPVIPVLLYMPAKVSAFSR 476

  Fly   363 EMLTR--GIYVIGFSYPVVPQGKARIRVQISAAHTEAEIDRAINAFIEVGRSLKV 415
            .:|.:  .:.|:||....:|:|:||.  .:|:|||...:|..:....|:|..|.|
Mouse   477 FLLKKKISVVVVGFPATSLPEGRARF--SMSSAHTREMLDTVLEVVDELGDLLNV 529

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GcatNP_648509.1 PRK06939 19..416 CDD:235893 122/380 (32%)
Sptlc3NP_780676.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..32
AAT_I 56..535 CDD:450240 122/380 (32%)
Blue background indicates that the domain is not in the aligned region.

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