DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Gcat and sptl-1

DIOPT Version :10

Sequence 1:NP_648509.1 Gene:Gcat / 39333 FlyBaseID:FBgn0036208 Length:417 Species:Drosophila melanogaster
Sequence 2:NP_001379707.1 Gene:sptl-1 / 173389 WormBaseID:WBGene00016020 Length:458 Species:Caenorhabditis elegans


Alignment Length:386 Identity:101/386 - (26%)
Similarity:180/386 - (46%) Gaps:53/386 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly    57 ITVQGSDKKILNFCANNYLGLANNPEIVEHSQKLLEQYGAGLSSVRFICGTQDIHKQLEKKIAQF 121
            :::.|  :|.||..:.|:|.......|.:.:::.:.:||.|....|...||.|:|..|||::|:|
 Worm    81 VSIDG--EKYLNMASTNFLSFIGVKRIEDRAKQTIFKYGVGSCGPRGFYGTVDVHLDLEKELAKF 143

  Fly   122 HGREDTILYASCFDANAGIFEAILTPEDAVFSDELNHASIIDGIRLCKAKKQRYRHRDLGDLEEQ 186
            .|.|:.:||:..|...:....|.....|.:|.||..:.:|..|::..:::.:.::|.|:..||..
 Worm   144 MGCEEAVLYSYGFATVSSAIPAYAKKGDVIFVDEGVNFAIQKGLQASRSRVEYFKHNDMEHLERL 208

  Fly   187 L------------KASDARLKLIATDGVFSMDGNIAPLARIVELARKYNALVFVDECHATGFFGA 239
            |            ||...| :.|..:|::....::.||.:|:|...::...||:||..:.|..|.
 Worm   209 LLEQEQRDKKDPKKAKSVR-RFIVVEGLYVNYADLCPLPKIIEFKWRFKVRVFIDESWSFGVIGK 272

  Fly   240 TGRGTEEYDNV-MGEVDIINSTLGKALGGASGGYTTGPAELISFLRQKSRPYLFSNTLPPAVVAV 303
            ||||..|:.|| |.:||::.::|..|| .::||:..|.:.::...|.....|.||.:|||.:...
 Worm   273 TGRGVTEHFNVPMEDVDMVMASLENAL-ASTGGFCVGRSYVVGHQRLSGLGYCFSASLPPLLATA 336

  Fly   304 GLKVMDMLLQSSELTQRVQSNTQ-------RFRQAMTKAGFTIAGENHPICPVM---------LG 352
            ..:.:.::   .|...|||..|:       :.:.|::.:.|::.|     ||..         ..
 Worm   337 ASEAISII---DEEPSRVQKVTEMAINGQKKLQDALSGSKFSLQG-----CPESPMKHIYYNGED 393

  Fly   353 DARLASQFADE-------MLTRGIYVIGFS-YPVVPQGKARIRVQISAAHTEAEIDRAINA 405
            :.:....|.:.       :|||..|:.... :.:.|.    |||......||.||.||::|
 Worm   394 EEKQLDTFVETVFTKNHLLLTRARYLDKDELFKIRPS----IRVMFQHDLTEEEIQRAVDA 450

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GcatNP_648509.1 PRK06939 19..416 CDD:235893 101/386 (26%)
sptl-1NP_001379707.1 AAT_I 9..455 CDD:450240 101/386 (26%)

Return to query results.
Submit another query.