DRSC/TRiP Functional Genomics Resources

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Protein Alignment Gcat and SPTLC1

DIOPT Version :10

Sequence 1:NP_648509.1 Gene:Gcat / 39333 FlyBaseID:FBgn0036208 Length:417 Species:Drosophila melanogaster
Sequence 2:NP_001268232.1 Gene:SPTLC1 / 10558 HGNCID:11277 Length:513 Species:Homo sapiens


Alignment Length:344 Identity:96/344 - (27%)
Similarity:171/344 - (49%) Gaps:25/344 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly    48 IITSSQSTQITVQGSDKKILNFCANNYLGLANNPEIVEHSQKLLEQYGAGLSSVRFICGTQDIHK 112
            |::...|.:..|.|  |:.:||.:.|:|||.:||.:...:...|::||.|....|...||.|:|.
Human    84 IVSGPPSHKTVVNG--KECINFASFNFLGLLDNPRVKAAALASLKKYGVGTCGPRGFYGTFDVHL 146

  Fly   113 QLEKKIAQFHGREDTILYASCFDANAGIFEAILTPEDAVFSDELNHASIIDGIRLCKAKKQRYRH 177
            .||.::|:|...|:.|:|:..|...|....|.....|.||.|.....:|..|::..::..:.::|
Human   147 DLEDRLAKFMKTEEAIIYSYGFATIASAIPAYSKRGDIVFVDRAACFAIQKGLQASRSDIKLFKH 211

  Fly   178 RDLGDLEEQLKASD---------ARL--KLIATDGVFSMDGNIAPLARIVELARKYNALVFVDEC 231
            .|:.|||..||..:         ||:  :.|..:|::...|.|.||..:|:|..||.|.:|::|.
Human   212 NDMADLERLLKEQEIEDQKNPRKARVTRRFIVVEGLYMNTGTICPLPELVKLKYKYKARIFLEES 276

  Fly   232 HATGFFGATGRG-TEEYDNVMGEVDIINSTLGKALGGASGGYTTGPAELISFLRQKSRPYLFSNT 295
            .:.|..|..||| ||.|...:.::|:|::.:..|| .:.||:..|.:.:|...|...:.|.||.:
Human   277 LSFGVLGEHGRGVTEHYGINIDDIDLISANMENAL-ASIGGFCCGRSFVIDHQRLSGQGYCFSAS 340

  Fly   296 LPPAVVAVGLKVMDMLLQSSELTQRVQSNTQRFRQAMTK-AGFTIAGEN-HPICPVML------- 351
            |||.:.|..::.::::.::..:...::....:..:|:.. :|..:.||: .|...:.|       
Human   341 LPPLLAAAAIEALNIMEENPGIFAVLKEKCGQIHKALQGISGLKVVGESLSPAFHLQLEESTGSR 405

  Fly   352 -GDARLASQFADEMLTRGI 369
             .|.||..:..|:.:.|.|
Human   406 EQDVRLLQEIVDQCMNRSI 424

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GcatNP_648509.1 PRK06939 19..416 CDD:235893 96/344 (28%)
SPTLC1NP_001268232.1 Interaction with SPTLC2. /evidence=ECO:0000269|PubMed:33558762 1..66
AAT_I 11..442 CDD:450240 96/344 (28%)
Blue background indicates that the domain is not in the aligned region.

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