DRSC/TRiP Functional Genomics Resources

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Protein Alignment Klp68D and SMY1

DIOPT Version :9

Sequence 1:NP_001261726.1 Gene:Klp68D / 39332 FlyBaseID:FBgn0004381 Length:784 Species:Drosophila melanogaster
Sequence 2:NP_012844.1 Gene:SMY1 / 853783 SGDID:S000001562 Length:656 Species:Saccharomyces cerevisiae


Alignment Length:693 Identity:167/693 - (24%)
Similarity:294/693 - (42%) Gaps:164/693 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly    20 VQVVVRCRPMSNRERSERSPEVVNVYPNRGVVELQNVV-DGNKEQRKVFTYDAAYDASATQTTLY 83
            ::|::|..|....:.:| |...::.|.|..:....|.: :..||....|.:|..:||:|||..:.
Yeast    28 IEVILRAIPEKGLQNNE-STFKIDPYENTVLFRTNNPLHETTKETHSTFQFDKVFDANATQEDVQ 91

  Fly    84 HEVVFPLVSSVLEGFNGCIFAYGQTGTGKTFTMEGVRGNDELMGIIPRTFEQIWLHINRTENFQ- 147
            ..:|.|:::.||.|:||.:..||.:.:||::::   .|:.|..||:|...:.::..:.:.|..: 
Yeast    92 KFLVHPIINDVLNGYNGTVITYGPSFSGKSYSL---IGSKESEGILPNICKTLFDTLEKNEETKG 153

  Fly   148 --FLVDVSYLEIYMEELRDLL--KPNSKHLEVRERGS--GVYVPNLHAINCKSVEDMIKVMQ--- 203
              |.|.|...|||||:..|||  .|..|.|::....|  .:.:.::...:..|.||:...:|   
Yeast   154 DSFSVSVLAFEIYMEKTYDLLVPLPERKPLKLHRSSSKMDLEIKDICPAHVGSYEDLRSYIQAVQ 218

  Fly   204 -VGNK----NRTVGFTNMNEHSSRSHAIFMIKIEMCDTETNTIKVGKLNLIDLAGSERQSKTGAS 263
             |||:    ::|        ..||||.:|.:.:|..:.:.:.:|...|.|:||.|:|:..|...|
Yeast   219 NVGNRMACGDKT--------ERSRSHLVFQLHVEQRNRKDDILKNSSLYLVDLHGAEKFDKRTES 275

  Fly   264 AERLKEASKINLALSSLGNVISAL----------AESSPHVPYRDSKLTRLLQDSLGGNSKTIMI 318
            ........|:|.::.:|.|.:.:|          |:.|....||:|:||.:|:||||||.||.:|
Yeast   276 TLSQDALKKLNQSIEALKNTVRSLSMKERDSAYSAKGSHSSAYRESQLTEVLKDSLGGNRKTKVI 340

  Fly   319 ANIGPSNYNYNETLTTLRYASRAKSIQNQPIKNEDP-----------QDAKLKE---------YQ 363
            .....|  |...||:||.:....:.|.|:...|...           ||.|:|:         .:
Yeast   341 LTCFLS--NVPTTLSTLEFGDSIRQINNKVTDNTTGLNLKKKMDLFIQDMKIKDDNYVAQINILK 403

  Fly   364 EEIERLKRLIGPQQQQRSEKQV--TAKKQRVK-KPKKETVTKEMSDSLQVSTIEQPVEDDSDPEG 425
            .||:.||.|......:..||::  ..||:.:| |.:.:::|:.:|.    ||.|.|         
Yeast   404 AEIDSLKSLHNKSLPEDDEKKMLENTKKENIKLKLQLDSITQLLSS----STNEDP--------- 455

  Fly   426 AESESDKENEAEVAKSNEELERERVE-NSKLAAKLAELEGQLVRGGKNLLDTYSERQIELEKKLV 489
                            |..::.|..| .:|...::|:||...            :||:....|| 
Yeast   456 ----------------NNRIDEEVSEILTKRCEQIAQLELSF------------DRQMNSNSKL- 491

  Fly   490 EIAERKKREIEIQQQLELQEETTLEIRERNVSLEQEVELKKRKLSKCYAKYLALQQELNDCKSDH 554
                        ||:||.::.....:...||.|.::::|::|::.:.......|:.||    ..|
Yeast   492 ------------QQELEYKKSKEEALESMNVRLLEQIQLQEREIQELLTTNAILKGEL----ETH 540

  Fly   555 NQDLRELEMAQNELVKELKRQLLIIDNFVPIEVKQRLYTQAKYDEEQEEWKFSSMSLPTPPGGDG 619
            .    :|...::|.:|.|:..:                         :|...:..::|:|..|..
Yeast   541 T----KLTETRSERIKSLESSV-------------------------KELSLNKSAIPSPRRGSM 576

  Fly   620 KFSSKRPVSHPQRRRPTSEYALQEAK--SNSPSSLRFKSENIV 660
            ..||...:.|           ::|..  ||||.|....|:.:|
Yeast   577 SSSSGNTMLH-----------IEEGSEISNSPWSANTSSKPLV 608

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Klp68DNP_001261726.1 Motor_domain 18..344 CDD:277568 100/349 (29%)
KISc 20..351 CDD:214526 102/356 (29%)
GBP_C <479..576 CDD:303769 21/96 (22%)
coiled coil 547..558 CDD:293879 2/10 (20%)
SMY1NP_012844.1 KISc_KHC_KIF5 25..364 CDD:276820 100/349 (29%)
Smc <254..568 CDD:224117 90/402 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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