DRSC/TRiP Functional Genomics Resources

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Protein Alignment Klp68D and Kif1a

DIOPT Version :10

Sequence 1:NP_524029.2 Gene:Klp68D / 39332 FlyBaseID:FBgn0004381 Length:784 Species:Drosophila melanogaster
Sequence 2:XP_038940678.1 Gene:Kif1a / 363288 RGDID:1304996 Length:1800 Species:Rattus norvegicus


Alignment Length:867 Identity:255/867 - (29%)
Similarity:375/867 - (43%) Gaps:226/867 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly    20 VQVVVRCRPMSNRERSERSPEVVN--------VYPNRGVVELQNVVDGNKEQRKVFTYDAAY--- 73
            |:|.||.||.::||.|..|..::.        |.|.:           .||..|.|::|.:|   
  Rat     6 VKVAVRVRPFNSREMSRDSKCIIQMSGSTTTIVNPKQ-----------PKETPKSFSFDYSYWSH 59

  Fly    74 ----DAS-ATQTTLYHEVVFPLVSSVLEGFNGCIFAYGQTGTGKTFTMEGVRGNDELMGIIPRTF 133
                |.: |:|..:|.::...::....||:|.|||||||||.||::||.|.:..|: .||||:..
  Rat    60 TSPEDINYASQKQVYRDIGEEMLQHAFEGYNVCIFAYGQTGAGKSYTMMGKQEKDQ-QGIIPQLC 123

  Fly   134 EQIWLHINRT--ENFQFLVDVSYLEIYMEELRDLLKPNSK-HLEVRERG-SGVYVPNLHAINCKS 194
            |.::..||.|  :|..:.|:|||:|||.|.:||||.|.:| :|.|||.. .|.||.:|..:...|
  Rat   124 EDLFSRINDTTNDNMSYSVEVSYMEIYCERVRDLLNPKNKGNLRVREHPLLGPYVEDLSKLAVTS 188

  Fly   195 VEDMIKVMQVGNKNRTVGFTNMNEHSSRSHAIFMIKI--EMCDTETN--TIKVGKLNLIDLAGSE 255
            ..|:..:|..|||.|||..|||||.||||||:|.|..  :..|.|||  |.||.|::|:||||||
  Rat   189 YNDIQDLMDSGNKARTVAATNMNETSSRSHAVFNIIFTQKRHDAETNITTEKVSKISLVDLAGSE 253

  Fly   256 RQSKTGASAERLKEASKINLALSSLGNVISALAE--SSPH----------VPYRDSKLTRLLQDS 308
            |...|||...||||.:.||.:|::||.|||||||  |.|:          :|||||.||.||:::
  Rat   254 RADSTGAKGTRLKEGANINKSLTTLGKVISALAEMDSGPNKNKKKKKTDFIPYRDSVLTWLLREN 318

  Fly   309 LGGNSKTIMIANIGPSNYNYNETLTTLRYASRAKSIQNQPIKNEDPQDAKLKEYQEEIERLKRLI 373
            |||||:|.|:|.:.|::.||:|||:|||||.|||.|:...|.||||.:..::|.::|:.||:.|:
  Rat   319 LGGNSRTAMVAALSPADINYDETLSTLRYADRAKQIRCNAIINEDPNNKLIRELKDEVTRLRDLL 383

  Fly   374 GPQQQQRSEKQVTAKKQRVKKPKKETVTKEMSDSLQVSTIEQPVEDDSD--------PEGAES-E 429
            ..|    ....:|........||.......||.|..:|.:.......|.        |...|: |
  Rat   384 YAQ----GLGDITDTNTVPGGPKLTNALVGMSPSSSLSALSSRAASVSSLHERILFAPGSEEAIE 444

  Fly   430 SDKENEAEVAKSNEELERE-------RVENSKLAAKL---------------------------- 459
            ..||.|..:|:.||..|.:       |:|...|.|::                            
  Rat   445 RLKETEKIIAELNETWEEKLRRTEAIRMEREALLAEMGVAMREDGGTLGVFSPKKTPHLVNLNED 509

  Fly   460 ----------------------AE------LEGQLVR------------GGKNLL--------DT 476
                                  ||      |.|..::            ||:.::        ||
  Rat   510 PLMSECLLYYIKDGVTRVGREDAERRQDIVLSGHFIKEEHCIFRSDSRGGGEAVVTLEPCEGADT 574

  Fly   477 YSERQIELEKKLVEIAER----KKREIEIQQQLELQEETTLEIRERNVSLEQEVELKKRKLSKCY 537
            |...:...|..::....|    |..........:.::|     |||....|...|    .:...:
  Rat   575 YVNGKKVTEPSILRSGNRIIMGKSHVFRFNHPEQARQE-----RERTPCAETPAE----PVDWAF 630

  Fly   538 AKYLALQQELNDCKSDHNQDLRELE----MAQNELVKELKRQLLIIDNFVPIEVKQ---RLYTQA 595
            |:...|:::..|.|.:..|.|:|||    ..:.|....|::|.|..::.:....||   |.|.:.
  Rat   631 AQRELLEKQGIDMKQEMEQRLQELEDQYRREREEATYLLEQQRLDYESKLEALQKQMDSRYYPEV 695

  Fly   596 KYDEEQEEWKFSSMSLPTPPGGDGKFSSKRPVSHPQRRRPTSEYALQEAKSNSPSSLR------- 653
            ..:||:.|                     ..|...:|....:.:|.::.|....:|||       
  Rat   696 NEEEEEPE---------------------DEVQWTERECELALWAFRKWKWYQFTSLRDLLWGNA 739

  Fly   654 --FKSENIVNYELE----------------------MPCRTTQEYRTPKVSASLQAVLAQAMQTG 694
              .|..|.::.||:                      :|....::..|.....::.||..|..:.|
  Rat   740 IFLKEANAISVELKKKVQFQFVLLTDTLYSPLPPDLLPPEAAKDRETRPFPRTIVAVEVQDQKNG 804

  Fly   695 GDDIDIVDSH---TNSLRSRLE 713
            .       :|   ...||.||:
  Rat   805 A-------THYWTLEKLRQRLD 819

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Klp68DNP_524029.2 KISc 20..351 CDD:214526 163/366 (45%)
Smc <431..>580 CDD:440809 42/239 (18%)
Kif1aXP_038940678.1 KISc_KIF1A_KIF1B 4..361 CDD:276816 163/366 (45%)
Kinesin_assoc 358..524 CDD:465047 33/169 (20%)
FHA_KIF1A 500..614 CDD:438778 13/118 (11%)
ERM_helical 633..>686 CDD:466641 12/52 (23%)
KIF1B 814..861 CDD:463574 4/6 (67%)
DUF3694 1250..1406 CDD:463599
PH_KIFIA_KIFIB 1681..1783 CDD:269939
Blue background indicates that the domain is not in the aligned region.

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