DRSC/TRiP Functional Genomics Resources

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Protein Alignment Klp68D and Kif12

DIOPT Version :9

Sequence 1:NP_001261726.1 Gene:Klp68D / 39332 FlyBaseID:FBgn0004381 Length:784 Species:Drosophila melanogaster
Sequence 2:XP_006238315.1 Gene:Kif12 / 313254 RGDID:1308487 Length:648 Species:Rattus norvegicus


Alignment Length:514 Identity:167/514 - (32%)
Similarity:245/514 - (47%) Gaps:104/514 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 AKSRRPGTGSSQTPNECVQVVVRCRPMSNRE--RSERS------PEVVNVYPNRGVVELQNVVDG 59
            |::...|...|:||   :|||:|.||||..|  |.|:|      ...:.|.|..|..::      
  Rat    12 ARNLEQGPEGSETP---IQVVLRVRPMSTVELRRGEQSALHCSGTRTLQVSPPGGGPDV------ 67

  Fly    60 NKEQRKVFTYDAAYDASATQTTLYHEV-VFPLVSSVLEGFNGCIFAYGQTGTGKTFTM------- 116
                  .|.:.|..|.:.||..::... |..|....|.||:..:|.:||||:|||:|:       
  Rat    68 ------AFRFGAVLDGARTQEDVFRACGVKRLGELALRGFSCTVFTFGQTGSGKTYTLTGPPPQA 126

  Fly   117 EGVRGNDELMGIIPRTFEQIWLHINRTENFQFLVDV--SYLEIYMEELRDLLKPNS-KHLEVR-E 177
            |||.....|.||:.|||  .|| ::|.::....|.:  ||||||.|:::|||...| :.|.|| .
  Rat   127 EGVPVPPSLAGIMQRTF--TWL-LDRMQHLDSPVTLRASYLEIYNEQVQDLLSQGSPRPLPVRWS 188

  Fly   178 RGSGVYVPNLHAINCKSVEDMIKVMQVGNKNRTVGFTNMNEHSSRSHAIFMIKIEMCDTETNTIK 242
            :..|.||..|..:.|.|:|.:::::|:|...|......:|:.||||||:..:.|.. .|......
  Rat   189 KARGFYVEQLRLVECGSLEALMELLQMGLSRRRSSSHTLNQASSRSHALLTLHISR-PTSQQVPP 252

  Fly   243 V--------GKLNLIDLAGSERQSKTGASAERLKEASKINLALSSLGNVISALAE---SSPHVPY 296
            |        |||..:||||||:.:.||:..:.:.||:.||.:|.:||:.||.|.:   ...|:|:
  Rat   253 VDLGEPPVGGKLCFVDLAGSEKVAATGSRGQLMLEANSINRSLLALGHCISLLLDPQRKQSHIPF 317

  Fly   297 RDSKLTRLLQDSLGGNSKTIMIANIGPSNYNYNETLTTLRYASRAKSIQNQP-------IKNEDP 354
            ||||||:||.|||||...|:|:|.:.||.....|||:||||||||:.|..:|       :|....
  Rat   318 RDSKLTKLLADSLGGRGVTLMVACVSPSAQCLPETLSTLRYASRAQRITTRPQGPKSPAVKPPQQ 382

  Fly   355 QDAKLKEYQEEIERLKRLIGPQQQQRSEKQVTAKKQRVKKPKKETVTKEMSDSLQVSTIEQPVED 419
            .:|:|.:.||| .|..||        ...|:..|..||...:.....:.:...||...:|     
  Rat   383 VEAELLQLQEE-NRCLRL--------QLDQMYTKAPRVHGARVAWAQRNLYGMLQEFMLE----- 433

  Fly   420 DSDPEGAESESDKENEAEVAKSNEELERE-----------RVENSKLAAKLAELEGQLV 467
                                  ||:|.:|           :.|...||.::.|||.:|:
  Rat   434 ----------------------NEKLRKEMRQLRSSRDLAQAEQHVLAQQIHELERRLL 470

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Klp68DNP_001261726.1 Motor_domain 18..344 CDD:277568 133/356 (37%)
KISc 20..351 CDD:214526 135/368 (37%)
GBP_C <479..576 CDD:303769
coiled coil 547..558 CDD:293879
Kif12XP_006238315.1 KISc 25..363 CDD:276812 133/356 (37%)
Kinesin 31..365 CDD:278646 130/349 (37%)
Kinesin-relat_1 <384..469 CDD:289481 25/120 (21%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG4280
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.810

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