DRSC/TRiP Functional Genomics Resources

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Protein Alignment Klp68D and Kifc3

DIOPT Version :10

Sequence 1:NP_524029.2 Gene:Klp68D / 39332 FlyBaseID:FBgn0004381 Length:784 Species:Drosophila melanogaster
Sequence 2:XP_038953626.1 Gene:Kifc3 / 307644 RGDID:1307693 Length:1033 Species:Rattus norvegicus


Alignment Length:440 Identity:163/440 - (37%)
Similarity:242/440 - (55%) Gaps:58/440 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly    20 VQVVVRCRPMSNRERSERSPEVVNVY----PNRGVVELQNVVDGNKEQRKVFTYDAAYDASATQT 80
            ::|:.|.||:: :|..| .||..|..    .:..::.|.     :|.:...|..|..:...|:|.
  Rat   601 IRVIARVRPVT-KEDGE-GPEATNAVTFDPDDDSIIHLL-----HKGKPVSFELDKVFSPWASQQ 658

  Fly    81 TLYHEVVFPLVSSVLEGFNGCIFAYGQTGTGKTFTMEGVRGNDELMGIIPRTFEQIWLHI-NRTE 144
            .::.||. .|::|.::|||.|||||||||.|||:||||...|.   ||..|..:.::..: .:..
  Rat   659 DVFQEVQ-ALITSCIDGFNVCIFAYGQTGAGKTYTMEGTPENP---GINQRALQLLFSEVQEKAS 719

  Fly   145 NFQFLVDVSYLEIYMEELRDLL--KPNSKHLEVR--ERGSG-VYVPNLHAINCKSVEDMIKVMQV 204
            ::|:.:.||..|||.|.|||||  :|..| ||:|  ..||| :|||.|.....:||:|:.||.:.
  Rat   720 DWQYNITVSAAEIYNEVLRDLLGKEPQEK-LEIRLCPDGSGQLYVPGLTEFQVQSVDDINKVFEF 783

  Fly   205 GNKNRTVGFTNMNEHSSRSHAIFMIKIEMCDTETNTIKVGKLNLIDLAGSERQSKTGASAERLKE 269
            |..|||..|||:|||||||||:.::.:...|..|.....|||||:|||||||..|:||...||:|
  Rat   784 GYNNRTTEFTNLNEHSSRSHALLIVTVRGVDCSTGLRTTGKLNLVDLAGSERVGKSGAEGNRLRE 848

  Fly   270 ASKINLALSSLGNVISALAESSPHVPYRDSKLTRLLQDSLGGNSKTIMIANIGPSNYNYNETLTT 334
            |..||.:||:||:||:||.....|||:|:||||.||||||.|:|||:|:..:.|...|.:|||.:
  Rat   849 AQHINRSLSALGDVIAALRSRQGHVPFRNSKLTYLLQDSLSGDSKTLMVVQVSPVEKNTSETLYS 913

  Fly   335 LRYASRAKSIQNQPIKNEDPQDAKLKEY--QEEIE---------------------------RLK 370
            |::|.|.:|::..|    ..:..:|..:  ||.:|                           .::
  Rat   914 LKFAERVRSVELGP----GSRRTELGSWSSQEHLEWEPACQTPQPTARAHSAPGSGTSSRPGSIR 974

  Fly   371 RLIGPQQQQRSEKQVTAKKQRVKKPKKETVTK--EMSDSLQVSTIEQPVE 418
            |.:.|.:::.:......:.|.:....:||.|:  :..||| |.|:.:..|
  Rat   975 RKLQPSEREETALSQAWRLQPIISTTRETDTRGFKSEDSL-VDTVSKQSE 1023

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Klp68DNP_524029.2 KISc 20..351 CDD:214526 147/340 (43%)
Smc <431..>580 CDD:440809
Kifc3XP_038953626.1 Spc7 <219..345 CDD:197874
SMC_prok_B <286..595 CDD:274008
KISc_C_terminal 598..925 CDD:276817 146/335 (44%)
Blue background indicates that the domain is not in the aligned region.

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