DRSC/TRiP Functional Genomics Resources

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Protein Alignment Klp68D and Kif13b

DIOPT Version :10

Sequence 1:NP_524029.2 Gene:Klp68D / 39332 FlyBaseID:FBgn0004381 Length:784 Species:Drosophila melanogaster
Sequence 2:NP_001398965.1 Gene:Kif13b / 305967 RGDID:1303307 Length:1843 Species:Rattus norvegicus


Alignment Length:771 Identity:249/771 - (32%)
Similarity:379/771 - (49%) Gaps:162/771 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly    20 VQVVVRCRPMSNRERSERSPEVVNVYPNRGVVELQNVVDGN------KEQRKVFTYDAAY---DA 75
            |:|.||.|||:.||....:..||:|..|:.::   |.::.|      :.|.|:|.||..:   |.
  Rat     6 VKVAVRVRPMNRREIDLHTKCVVDVEANKVIL---NPINTNLSKGDARGQPKIFAYDHCFWSMDE 67

  Fly    76 SATQTTLYHEVVFP-----LVSSVLEGFNGCIFAYGQTGTGKTFTMEGVRGNDELMGIIPRTFEQ 135
            |..:.....:.||.     ::.:..:|:|.|||||||||:||::||   .|..:..|:|||....
  Rat    68 SVREKYAGQDDVFKCLGENILQNAFDGYNACIFAYGQTGSGKSYTM---MGTADQPGLIPRLCSG 129

  Fly   136 IWLHINRTENFQ--FLVDVSYLEIYMEELRDLLKPNSKH--LEVRERG-SGVYVPNLHAINCKSV 195
            ::....:.||.:  |.|:|||:|||.|::||||.|....  |:|||.. .|.||..|..:...|.
  Rat   130 LFERTQKEENEEQSFKVEVSYMEIYNEKVRDLLDPKGSRQTLKVREHSVLGPYVDGLSKLAVTSY 194

  Fly   196 EDMIKVMQVGNKNRTVGFTNMNEHSSRSHAIFMIKI--EMCDTETNTI--KVGKLNLIDLAGSER 256
            :|:..:|..|||:|||..|||||.||||||:|.|.:  .:.|.::.|.  |||||:|:|||||||
  Rat   195 KDIESLMSEGNKSRTVAATNMNEESSRSHAVFKITLTHTLYDVKSGTSGEKVGKLSLVDLAGSER 259

  Fly   257 QSKTGASAERLKEASKINLALSSLGNVISALAE------SSPHVPYRDSKLTRLLQDSLGGNSKT 315
            .:||||:.:||||.|.||.:|::||.||||||:      .:..||||||.||.||:|||||||||
  Rat   260 ATKTGAAGDRLKEGSNINKSLTTLGLVISALADQGAGKNKNKFVPYRDSVLTWLLKDSLGGNSKT 324

  Fly   316 IMIANIGPSNYNYNETLTTLRYASRAKSIQNQPIKNEDPQDAKLKEYQEEIERLKRLI------- 373
            .|:|.:.|:..||:|||:|||||.|||.|.|..:.||||....:::.:||:|:|:..:       
  Rat   325 AMVATVSPAADNYDETLSTLRYADRAKHIINHAVVNEDPNARIIRDLREEVEKLREQLTKAEAMK 389

  Fly   374 GPQQQQR---SEK---QVTAKKQRVKKPKKETVTKE-------MSDSLQVSTIEQPVEDD----- 420
            .|:.:.|   |||   ::|...:. |..|.|.:.:|       :..|||.|.|:  |.||     
  Rat   390 SPELKDRLEESEKLIQEMTVTWEE-KLRKTEEIAQERQKQLESLGISLQTSGIK--VGDDKCFLV 451

  Fly   421 ---SDPE---------------GAESESDKE----------------NEAEVAKSNEELERERVE 451
               :||.               |:.:..|.:                .|.:|..:.::..|..|.
  Rat   452 NLNADPALNELLVYYLKEHTLIGSANSQDIQLCGMGILPEHGIIDIMPEGQVMLTPQKNTRTFVN 516

  Fly   452 NSKLAAKLAELEGQLVRGGKNLLDTYSERQIELEKKLVEIAERKKREIEIQ-----QQLELQEET 511
            .|.:::.:....|..:..|.|   .:....:..:||..| .|.::||..::     :||:...::
  Rat   517 GSSVSSPIQLHHGDRILWGNN---HFFRLNLPKKKKKAE-REDEEREASLKNDSSSEQLDADGDS 577

  Fly   512 TLEI-RERNVSLE---QEVELKKRKLSKCYAKYLALQQELNDCKSDHNQDLRELEMAQNELVKEL 572
            :.|: .|.|.:.|   .||.:      |.......:|..|:..:..|.::.|          ..|
  Rat   578 SSEVSSEINFNFEYAQMEVTM------KALGSNDPMQSILSSLEQQHEEEKR----------SAL 626

  Fly   573 KRQLLIIDNFVPIEVKQRLYTQAKYDEEQEEWKFSSMSLPTPPGGDGKFSSKRPVSHPQRRRPTS 637
            :||.|:.::    |::|   .:.:...|::..:           |..:.|...| |..||.|..:
  Rat   627 ERQRLMYEH----ELEQ---LRRRLSPERQNCR-----------GVDRLSFHSP-SAQQRLRQWA 672

  Fly   638 EYALQEAKSNSPSSLRFKSENIVNYEL----------EMPCRTTQEYR-TPKVSAS 682
            |    |.::...:||....|.||...|          |:..||  ||: |.::.||
  Rat   673 E----EREATLNNSLMRLREQIVKANLLVREASYIAEELDKRT--EYKVTLQIPAS 722

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Klp68DNP_524029.2 KISc 20..351 CDD:214526 162/359 (45%)
Smc <431..>580 CDD:440809 32/173 (18%)
Kif13bNP_001398965.1 KISc_KIF1A_KIF1B 4..360 CDD:276816 162/359 (45%)
Kinesin_assoc 357..469 CDD:465047 28/114 (25%)
FHA_KIF13B 447..545 CDD:438782 12/100 (12%)
COG4913 <614..>760 CDD:443941 32/144 (22%)
KIF1B 756..802 CDD:463574
C2-C2_1 <888..>952 CDD:463310
bMERB_dom <1073..1143 CDD:463467
DUF3694 <1214..1277 CDD:463599
PHA03247 <1377..1715 CDD:223021
CAP_GLY 1720..1783 CDD:460154
Blue background indicates that the domain is not in the aligned region.

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