DRSC/TRiP Functional Genomics Resources

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Protein Alignment Klp68D and Kif1c

DIOPT Version :10

Sequence 1:NP_524029.2 Gene:Klp68D / 39332 FlyBaseID:FBgn0004381 Length:784 Species:Drosophila melanogaster
Sequence 2:NP_665884.2 Gene:Kif1c / 113886 RGDID:70928 Length:1100 Species:Rattus norvegicus


Alignment Length:964 Identity:265/964 - (27%)
Similarity:411/964 - (42%) Gaps:265/964 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly    20 VQVVVRCRPMSNRERSERSPEVVNVYPNRGVVELQNVVD--GNKEQRKVFTYDAAY--------D 74
            |:|.||.||.:.||.|:.:..||::..|     ..::::  .:|:..|.||:|.:|        .
  Rat     6 VKVAVRVRPFNARETSQDAKCVVSMQGN-----TTSIINPKQSKDAPKSFTFDYSYWSHTSVEDP 65

  Fly    75 ASATQTTLYHEVVFPLVSSVLEGFNGCIFAYGQTGTGKTFTMEGVRGNDELMGIIPRTFEQIW-- 137
            ..|:|..:|.::...::....||:|.|||||||||.||::||.| |......||:|:..|.::  
  Rat    66 QFASQQQVYRDIGEEMLLHAFEGYNVCIFAYGQTGAGKSYTMMG-RQEPGQQGIVPQLCEDLFSR 129

  Fly   138 LHINRTENFQFLVDVSYLEIYMEELRDLLKPNSK-HLEVRERG-SGVYVPNLHAINCKSVEDMIK 200
            :::|::....:.|:|||:|||.|.:||||.|.|: .|.|||.. .|.||.:|..:...|..|:..
  Rat   130 VNVNQSAQLSYSVEVSYMEIYCERVRDLLNPKSRGSLRVREHPILGPYVQDLSKLAVTSYADIAD 194

  Fly   201 VMQVGNKNRTVGFTNMNEHSSRSHAIFMI--------KIEMCDTETNTIKVGKLNLIDLAGSERQ 257
            :|..|||.|||..|||||.||||||:|.|        ::...|:|    ||.|::|:|||||||.
  Rat   195 LMDCGNKARTVAATNMNETSSRSHAVFTIVFTQRSHDQLTGLDSE----KVSKISLVDLAGSERA 255

  Fly   258 SKTGASAERLKEASKINLALSSLGNVISALAE------SSPHVPYRDSKLTRLLQDSLGGNSKTI 316
            ..:||...||||.:.||.:|::||.||||||:      .|..:|||||.||.||:::|||||:|.
  Rat   256 DSSGARGMRLKEGANINKSLTTLGKVISALADLQSKKRKSDFIPYRDSVLTWLLKENLGGNSRTA 320

  Fly   317 MIANIGPSNYNYNETLTTLRYASRAKSIQNQPIKNEDPQDAKLKEYQEEIERLKRLI-------- 373
            |||.:.|::.||.|||:|||||.|.|.|:...:.||||....::|.|||:.||:.|:        
  Rat   321 MIAALSPADINYEETLSTLRYADRTKQIRCNAVINEDPNARLIRELQEEVARLRELLMAQGLSAS 385

  Fly   374 ---GPQQQQRSEKQVTAKKQRVKKPKKETVTKEMSDSLQVSTIEQPVEDDSDPEGAESESDKENE 435
               |.:.::.|...|.........|...:.....:..|:.| .....|....||.| .|..:|.|
  Rat   386 ALGGLKVEEGSPGGVLPAASSPPAPASPSSPPPHNGELEPS-FSPSAEPQIGPEEA-MERLQETE 448

  Fly   436 AEVAKSNEELERE-------RVENSKLAAKLAELEGQLVRGGKNLLDTYSER------------- 480
            ..:|:.||..|.:       |:|...|.|::    |..||.....:..:|.:             
  Rat   449 KIIAELNETWEEKLRKTEALRMEREALLAEM----GVAVREDGGTVGVFSPKKTPHLVNLNEDPL 509

  Fly   481 -----------------QIELEKKLVEIAERKK----REI-----EIQQQLE------------- 506
                             |::::.||.....|::    |.|     |:...||             
  Rat   510 MSECLLYHIKDGVTRVGQVDVDIKLTGQFIREQHCLFRSIPQPDGEVMVTLEPCEGAETYVNGKL 574

  Fly   507 LQEETTLEIRERNV---------SLEQEVELKKRK------------LSKCYAKYLALQQELNDC 550
            :.|...|:...|.|         :..::..|::.:            :...:|:...|:|:..|.
  Rat   575 VTEPLVLKSGNRIVMGKNHVFRFNHPEQARLERERGVPPPPGPPSEPVDWNFAQKELLEQQGIDI 639

  Fly   551 KSDHNQDLRELEMAQNELVKELKRQLLIIDNFVPIEVKQRLYTQAKYDEE------QEEWK-FSS 608
            |.:..:.|::||   |:..||.:...|:::       :||||..:...|:      :|.|: .||
  Rat   640 KLEMEKRLQDLE---NQYRKEKEEADLLLE-------QQRLYADSDSGEDSDKRSCEESWRLISS 694

  Fly   609 MSLPTPPG------------GDGKFSSKRPVSH-PQRRRPTSEYALQ--EAKSNSPSSLRFKSEN 658
            :....||.            ..||..:.|.|.. |||||      ||  :.:..:.:.|:.::..
  Rat   695 LREQLPPNTVQTIVKRCGLPSSGKRRAPRRVYQIPQRRR------LQGKDPRWATMADLKMQAVK 753

  Fly   659 IVNYELEMP--------------------CRTTQEYRTPK-VSASLQAVLAQAMQTGGDDIDIVD 702
            .:.||:.:.                    |||   |..|: ...:.:||......|.|::     
  Rat   754 EICYEVALADFRHGRAEIEALAALKMRELCRT---YGKPEGPGDAWRAVARDVWDTVGEE----- 810

  Fly   703 SHTNSLRSRLENIINANANGGAGPGAGVAVGSSIPNV---------------------------- 739
                           ....||.|.|...|.|:.:.::                            
  Rat   811 ---------------EGCGGGGGGGEEGARGAEVEDLRAHIDKLTGILQEVKLQNSSKDRELQAL 860

  Fly   740 --RNIKSSRGLPSAASNLDSNRR-------PPTG-----------RLPAKKPAS 773
              |.::..|.:|......|.|..       ||.|           ..||.:|:|
  Rat   861 RDRMLRMERVIPLTQDLEDDNEESGLVTWAPPEGSEAVEEAVSNDHSPAVRPSS 914

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Klp68DNP_524029.2 KISc 20..351 CDD:214526 151/358 (42%)
Smc <431..>580 CDD:440809 40/228 (18%)
Kif1cNP_665884.2 KISc_KIF1A_KIF1B 4..355 CDD:276816 151/358 (42%)
Kinesin_assoc 352..522 CDD:465047 36/175 (21%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 398..435 5/37 (14%)
FHA_KIF1C 498..599 CDD:438780 13/100 (13%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 900..924 4/15 (27%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 949..1100
Blue background indicates that the domain is not in the aligned region.

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