DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Klp68D and kif3c

DIOPT Version :10

Sequence 1:NP_524029.2 Gene:Klp68D / 39332 FlyBaseID:FBgn0004381 Length:784 Species:Drosophila melanogaster
Sequence 2:XP_002942156.1 Gene:kif3c / 100491018 XenbaseID:XB-GENE-959437 Length:753 Species:Xenopus tropicalis


Alignment Length:794 Identity:328/794 - (41%)
Similarity:475/794 - (59%) Gaps:92/794 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly    12 SSQTPNECVQVVVRCRPMSNRERSERSPEVVNVYPNRGVVELQNVVDGNKEQRKVFTYDAAYDAS 76
            |....:|.::|||||||.:.:|.:.....:|::....|.|.:::......|..|.||:||.||||
 Frog     3 SKAKSSEALKVVVRCRPTNRKEEAAGYEGIVDMDIKLGQVTMRHPRANPGELAKTFTFDAVYDAS 67

  Fly    77 ATQTTLYHEVVFPLVSSVLEGFNGCIFAYGQTGTGKTFTMEGVRGNDELMGIIPRTFEQIWLHIN 141
            :.|..||.|.|.||:.|||:||||.||||||||||||:||:||....|..|:||.||:.|:.||:
 Frog    68 SKQADLYDETVRPLIDSVLQGFNGTIFAYGQTGTGKTYTMQGVWAEPEKRGVIPNTFDHIFTHIS 132

  Fly   142 RTENFQFLVDVSYLEIYMEELRDLL-KPNSKHLEVRER-GSGVYVPNLHAINCKSVEDMIKVMQV 204
            |::|.|:||..||||||.||:|||| |..::.||::|. .:|||:.:|.:...|:|:::..||.:
 Frog   133 RSQNQQYLVRASYLEIYQEEIRDLLCKDQNRKLELKENPETGVYIKDLSSFVTKNVKEIEHVMNL 197

  Fly   205 GNKNRTVGFTNMNEHSSRSHAIFMIKIEMC-----DTETNTIKVGKLNLIDLAGSERQSKTGASA 264
            ||::|:|..|.|||:|||||.||:|.:| |     |.|.: |:||||||:||||||||||||.:.
 Frog   198 GNQSRSVACTYMNEYSSRSHTIFVITVE-CSEIGVDGEEH-IRVGKLNLVDLAGSERQSKTGING 260

  Fly   265 ERLKEASKINLALSSLGNVISALAES-SPHVPYRDSKLTRLLQDSLGGNSKTIMIANIGPSNYNY 328
            :|.||||||||:||:||||||||.:. |.|:||||||||||||||||||:||||:|.:||::.||
 Frog   261 DRPKEASKINLSLSALGNVISALVDGRSTHIPYRDSKLTRLLQDSLGGNAKTIMVATLGPASVNY 325

  Fly   329 NETLTTLRYASRAKSIQNQPIKNEDPQDAKLKEYQEEIERLKRLIGPQQQQRSEKQVTAKKQRVK 393
            :|||:|||:|:|||:|:|:|..||||:|..|:|:||||.|||       .|..::.:.:||:|..
 Frog   326 DETLSTLRFANRAKNIKNKPRINEDPKDTLLREFQEEIARLK-------AQLEKRGMLSKKRRRN 383

  Fly   394 KPKKETV----------TKEMSDSL-----------QVSTIEQPVEDDSDPEGAESESDKENEAE 437
            ..:|::|          .::..|.|           |...|||......|.....:|...:...|
 Frog   384 SRRKKSVDGDGTPDTEAEEDNEDKLIEKNVGSYLKEQAERIEQEKAAIQDDHSLLAEEKLKLIEE 448

  Fly   438 VAKSNEELERERVENSKLAAKLAELEGQLVRGGKNLLDTYSERQIELEKKLVEIAERKKREIEIQ 502
            ..|..::|.:|:.....||.|...:|.:|:.||||::|..:|:|..||.|..||||:|:||.||.
 Frog   449 KEKMMDDLTKEQKATELLAVKFKAMESKLLVGGKNIMDHTNEQQKMLEIKRQEIAEQKRREREIL 513

  Fly   503 QQLELQEETTLEIRERNVSLEQEVELKKRKLSKCYAKYLALQQELNDCKSDHNQDLRELEMAQNE 567
            ||:.|::|.|:::|....||:||||:|.:||.|.|||..|::.|:.|...::.:..::||.||||
 Frog   514 QQMLLRDEATVDLRGTYTSLQQEVEMKTKKLKKLYAKLQAVKGEIQDQHDEYVRVRQDLEQAQNE 578

  Fly   568 LVKELKRQLLIIDNFVPIEVKQRLYTQAKYDEEQEEWKFSSMSLPTPPG---GDGKFSSKRPVSH 629
            ..:|||.:.|||:||:|.|.|.::..:..||.|:::|||..:   .|||   |......:||.|.
 Frog   579 QTRELKFKYLIIENFIPPEEKNKIMNRLYYDSEEDQWKFQPL---VPPGNASGGNDTMKRRPSSA 640

  Fly   630 PQRRRPTSEYA-LQEAKSNSPSSLRFKSENIVNYELEMPCRTTQEYRTPKVSASLQAVLAQAMQT 693
            ...:||.|:|| :.......|   |:::|||:..||::         ||      .|:.......
 Frog   641 VGYKRPISQYARVAMVMGYHP---RYRAENIMFLELDL---------TP------PALFEMDFSK 687

  Fly   694 GGDDIDIVDSHTNSLRSRLENIINANANGGAGPGAGVAVGSSIPNVRNIKSSRG-------LPSA 751
            ...:.|....|...| :||::::..                  |....::.||.       |||:
 Frog   688 DRSEQDPRALHLERL-TRLDSLMER------------------PAAARVRKSRSWCQQPKLLPSS 733

  Fly   752 ASNL---DSNRRPP 762
            .:::   .|::|.|
 Frog   734 TTHISLTSSSQRCP 747

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Klp68DNP_524029.2 KISc 20..351 CDD:214526 189/338 (56%)
Smc <431..>580 CDD:440809 61/148 (41%)
kif3cXP_002942156.1 KISc_KIF3 9..341 CDD:276822 187/333 (56%)
SMC_N <340..618 CDD:481474 103/284 (36%)

Return to query results.
Submit another query.