DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Klp68D and kifc2

DIOPT Version :10

Sequence 1:NP_524029.2 Gene:Klp68D / 39332 FlyBaseID:FBgn0004381 Length:784 Species:Drosophila melanogaster
Sequence 2:XP_002941548.2 Gene:kifc2 / 100485082 XenbaseID:XB-GENE-995645 Length:924 Species:Xenopus tropicalis


Alignment Length:350 Identity:140/350 - (40%)
Similarity:194/350 - (55%) Gaps:31/350 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly    20 VQVVVRCRPMSNRERSERSPEVVNVYPNRGVVELQNVVDGNKEQR---------KVFTYDAAYDA 75
            ::|:.|.||.|:....|            |.:.....:|.|.:.|         |.|..|..:..
 Frog   586 IRVLCRVRPHSHNNEEE------------GSLTSPITIDMNDDTRLSVFYKGKEKNFELDKVFVP 638

  Fly    76 SATQTTLYHEVVFPLVSSVLEGFNGCIFAYGQTGTGKTFTMEGVRGNDELMGIIPRTFEQIWLHI 140
            .|.|..::.|:. |:|.|.:.|:|.|||||||||:|||:||||...|.   ||..|..:.::..:
 Frog   639 QAKQEEVFQEIE-PMVMSCINGYNVCIFAYGQTGSGKTYTMEGTLENP---GINQRAMQALYKEM 699

  Fly   141 N-RTENFQFLVDVSYLEIYMEELRDLLK--PNSK-HLEVRERGSG-VYVPNLHAINCKSVEDMIK 200
            . |...:.:.|.:|.:|||.|.:||||.  |..| .:::...||| ::||.|.:....|...:.|
 Frog   700 EARKGLWHYTVSLSMVEIYNEVIRDLLSKDPQEKLDIKLNPDGSGQLHVPGLTSTEVNSFRHIKK 764

  Fly   201 VMQVGNKNRTVGFTNMNEHSSRSHAIFMIKIEMCDTETNTIKVGKLNLIDLAGSERQSKTGASAE 265
            ::.:|.|||....|||||.||||||:..|.|...|..|.|:..|||||:|||||||..|:||..|
 Frog   765 LLTLGKKNRATFCTNMNERSSRSHALLTINISGKDLTTGTVTTGKLNLVDLAGSERVCKSGAEGE 829

  Fly   266 RLKEASKINLALSSLGNVISALAESSPHVPYRDSKLTRLLQDSLGGNSKTIMIANIGPSNYNYNE 330
            |||||..||.:|.:||.||.||.....|:|:|:||||.|||||||..:||:|:..:.||..|..|
 Frog   830 RLKEAQNINKSLLALGEVIQALRAKQGHIPFRNSKLTYLLQDSLGKGNKTVMMVQVSPSEGNVGE 894

  Fly   331 TLTTLRYASRAKSIQNQPIKNE-DP 354
            |:.:|::|.|...::..|.... ||
 Frog   895 TVCSLKFAQRVCKVELGPASRRIDP 919

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Klp68DNP_524029.2 KISc 20..351 CDD:214526 138/344 (40%)
Smc <431..>580 CDD:440809
kifc2XP_002941548.2 SMC_prok_B 230..>535 CDD:274008
KISc_C_terminal 583..910 CDD:276817 137/339 (40%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.