DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG10907 and rct1

DIOPT Version :10

Sequence 1:NP_648508.1 Gene:CG10907 / 39331 FlyBaseID:FBgn0036207 Length:502 Species:Drosophila melanogaster
Sequence 2:NP_595894.1 Gene:rct1 / 2539942 PomBaseID:SPBC17G9.05 Length:432 Species:Schizosaccharomyces pombe


Alignment Length:517 Identity:126/517 - (24%)
Similarity:201/517 - (38%) Gaps:128/517 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly    15 VLLKTTVGDIDIELWARECPKACRNFVQLCLEGYYKNTEFHRLVKGFIVQGGDPNG-DGTGGESI 78
            ||::|||||:.|:|:.:|.||.|.||::||...||....|:.:...:..|.|||.| .|.||..:
pombe     3 VLIETTVGDLVIDLFVKEAPKTCENFLKLCKLKYYNFCPFYNIQHNYTCQTGDPLGPTGDGGRCV 67

  Fly    79 YG------QPFKDEFHSRLRYTRRGLVGMAN---SGKDDN----GSQFFFTFAPTPE-LQNKNTL 129
            :.      :.||.||:..|.:.:.|||.|:.   |.:||.    ||||..|.:...| |..:..:
pombe    68 WNVLNKGTRFFKAEFNPSLVHNKMGLVSMSTATISSRDDKLLVCGSQFIITLSDNLEGLDERYPI 132

  Fly   130 FGKITG--DTIYNMLKLEDGIVDHQERPMHAHRIVSTEVLSNPFDDIVPRILSQPSTKSKKTKKE 192
            :|::..  ||   :||:.|.|.|.:.:|....||..|.:|.:||:|  |..|.:|......|.::
pombe   133 YGQVAEGFDT---LLKINDAICDEEGQPYRDIRIKHTIILDDPFED--PPDLVEPLRSPSPTPEQ 192

  Fly   193 RQGVKNFGLLSFGEEAEGDEEETNVYVKQNAGKAKSLHDVTDDPKLSKEPIRVPKVEKADIEEHL 257
            ...|:      .||..:.:.|                   |.:.||.:|.....:.|...:|  :
pombe   193 LATVR------IGENEQIESE-------------------TSEDKLQREKEMEAEAEAVTLE--M 230

  Fly   258 SDDCPEDSVKDKPSTASSDLIKMKLSKRSKSGADKKVQPVEEKSDSEDDEDVLLTREEEQSRKVS 322
            ..|.|...|    :...:.|...||:            ||.:      |||:.|         :.
pombe   231 IGDLPFAHV----APPENVLFVCKLN------------PVTQ------DEDLEL---------IF 264

  Fly   323 EEKSKIREEIASLKKQYQMDKQSKDKL------VNGQEKAAKS-----NEIKGSSENHYINDFIE 376
            ....||      :..|...||::.|.|      .:.:|...|:     |.:...|..|.  ||.:
pombe   265 SRFGKI------ISCQVIRDKETGDSLQYAFIEFDNKESVEKAYFKMQNVLIDDSRIHV--DFSQ 321

  Fly   377 SKEKYTAKVKLQPKGQSREAFTLSLLSKFRTKLDNLKQKSSSDDGESEPKDIDDRVVEQEIIGDD 441
            |..:|.                    ..:.:..|..:..|.|||.|...:  .|...::....||
pombe   322 SVARYR--------------------QYYNSNRDRKRSSSRSDDREYHRR--SDGRYDRSNYRDD 364

  Fly   442 WLSHTLNFNSTTPVLAKDANKKGDDWYDAYDPRNPLNKRKRGETGSSKSSSG-KSKSSKRDF 502
            : .|...........:...|::..::|.  |.|   :..||..||:...... :.||.:|.:
pombe   365 Y-RHRRKERDHRDDQSSFRNERFSNYYG--DDR---SYHKRRNTGNKNCDDHLRDKSPERRY 420

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG10907NP_648508.1 cyclophilin_CeCYP16-like 8..178 CDD:238906 64/179 (36%)
PTZ00121 <279..>426 CDD:173412 30/157 (19%)
CWC27_CTD 390..451 CDD:412084 10/60 (17%)
rct1NP_595894.1 cyclophilin_RRM 4..176 CDD:238902 62/176 (35%)
RRM_PPIL4 241..323 CDD:409681 23/116 (20%)

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