DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG10907 and ppwd1

DIOPT Version :10

Sequence 1:NP_648508.1 Gene:CG10907 / 39331 FlyBaseID:FBgn0036207 Length:502 Species:Drosophila melanogaster
Sequence 2:XP_002934239.3 Gene:ppwd1 / 100488042 XenbaseID:XB-GENE-1001509 Length:640 Species:Xenopus tropicalis


Alignment Length:167 Identity:69/167 - (41%)
Similarity:96/167 - (57%) Gaps:23/167 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly    12 SGKVLLKTTVGDIDIELWARECPKACRNFVQLCLEGYYKNTEFHRLVKGFIVQGGDPNGDGTGGE 76
            |...::.|::|||.::|:..||||...||......|||....|||::|||::|.|||.|.|.|||
 Frog   485 SDSAIIHTSMGDIHVKLFPVECPKTVENFCVHSRNGYYNRHMFHRVIKGFMIQTGDPTGTGMGGE 549

  Fly    77 SIYGQPFKDEFHSRLRYTRRGLVGMANSGKDDNGSQFFFTFAPTPELQNKNTLFGKIT-GDTIYN 140
            ||:|..|:||||:.||:.|...:.|||:|...||||||.|..|||.|.||:|:||::| |..:  
 Frog   550 SIWGGEFEDEFHATLRHDRPYTLSMANAGPSTNGSQFFLTVVPTPWLDNKHTVFGRVTKGMEV-- 612

  Fly   141 MLKLEDGIVDHQERPMHAHRIVSTEV---LSNPFDDI 174
                             ..||.:::|   ...|::||
 Frog   613 -----------------VQRICNSKVNPKTDKPYEDI 632

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG10907NP_648508.1 cyclophilin_CeCYP16-like 8..178 CDD:238906 69/167 (41%)
PTZ00121 <279..>426 CDD:173412
CWC27_CTD 390..451 CDD:412084
ppwd1XP_002934239.3 WD40 83..312 CDD:475233
WD40 repeat 88..125 CDD:293791
WD40 repeat 131..169 CDD:293791
WD40 repeat 177..213 CDD:293791
WD40 repeat 221..266 CDD:293791
cyclophilin_WD40 489..637 CDD:238908 68/163 (42%)
Blue background indicates that the domain is not in the aligned region.

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