DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG5964 and fbf1

DIOPT Version :9

Sequence 1:NP_648507.1 Gene:CG5964 / 39330 FlyBaseID:FBgn0036206 Length:928 Species:Drosophila melanogaster
Sequence 2:XP_004918509.1 Gene:fbf1 / 100127655 XenbaseID:XB-GENE-958098 Length:1113 Species:Xenopus tropicalis


Alignment Length:1032 Identity:223/1032 - (21%)
Similarity:420/1032 - (40%) Gaps:234/1032 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 DDPLAELLSDNSLDNDNFFETPAGVGHKKPAKLAKPKGKLEDLFGIQEETEADVQGQGTGARKTP 69
            :||||.:||    |.|:..:           |..||:|          .|..:.......:..|.
 Frog   176 NDPLAGILS----DEDDLVD-----------KKIKPRG----------STATEKPKSAPESAPTK 215

  Fly    70 NAISTPRIVKQKPSISL-----------DDDLVEDDDLGFD--PKRPKSGGTKRSLFDDLLTSNA 121
            :|.:.| |...|||::.           .|||:  |.||||  |:|.:   .|.|       |..
 Frog   216 SADNLP-ISPAKPSLTTLKKDEFNFGEETDDLM--DALGFDNSPERTR---VKES-------SAP 267

  Fly   122 EPKKNIFDEILA-GDAVK---RPATSK-------PSMSRQ---------------STDTTTDNSQ 160
            .|.::..||:|. |.|.|   ||.|.:       |...:|               |...|.::.:
 Frog   268 PPARSKLDELLGRGTAAKLLERPPTGERKEFKLDPKYQKQQENQNTPDDADINFGSYQPTVNSPE 332

  Fly   161 ARPKTSTGRRSSAQSATINMNADPLGLFGRDTNATVSGMSTPVSKKRGTTADWLGLEQE----PD 221
            .||......|.||..:. |..::     ||..::|.:..| |...:|| .||||||:.:    ||
 Frog   333 GRPSRRPSVRFSADGSD-NFKSE-----GRSRSSTPATRS-PARGERG-GADWLGLKDDDIDVPD 389

  Fly   222 QRPITP---KAQTAKAQPSSESPSKNTADILRLPDSDENGMEQEAEMAAVPAPSVVTAATQNILM 283
            ..|..|   ..::|...|||.....:...|...|.:......|||...|......:|        
 Frog   390 FTPSLPVRDPPRSAGVTPSSAGRPTSGNKIADKPINQTRSGLQEAASVAQEDDGWLT-------- 446

  Fly   284 LSNLNLESNHKFNALQQQEAQLVIAAQMKSQERTLLEMQRRQEDQDRKFQALIQQQLQRQQQMEE 348
                        :||.|::||     :.:.:|::  :.|.||||......|:..|...::..:.:
 Frog   447 ------------SALSQKKAQ-----KQEMEEKS--KSQARQEDVTGSSPAVFSQTSSQESAVNK 492

  Fly   349 ----------HIKGQQERINMHLQLMMSQPVRV----------------QDVVSTPPLVEKPEPE 387
                      .:.|..::::..:.....:.::.                |.|||.|  :|:...:
 Frog   493 GTRETGMVVAEVSGSPKKVSTFVAPKQEETIQTAVTGPSQEHGTARTLQQTVVSRP--LERKARD 555

  Fly   388 PERKEHHKATSQEQEHLLLLEMDAKRNLLEKQRLDELVANMKVNYEQEIEMIDSSYKKQIKVLEE 452
            .:| :.|....|.|..::.||...::..||:.:.:.|:..::..:::::|:|:::::.::|::|:
 Frog   556 GDR-DLHGDPLQAQNRVMDLEAQVRKLQLERDQQNLLLETLRERHQEDMELIENAHRSRLKLVED 619

  Fly   453 HLSVVEKRLKDENSELRQYYIEKLEKQKED-------YVEQISSLRQDHEDEVRKLRQ------- 503
            .....|:||:.||.||...|:.:.:..:.:       |.::::..:|:.|.|:.::|:       
 Frog   620 SARQREERLRLENQELSAQYLSRCQSTETEKAELLAQYQKKLTEFQQEKELELERIRELQRVFVQ 684

  Fly   504 ----SHELDLEGIRQAKMVELSAVQDHGNYLDTLRLASSNLQELRDGMSD--------NQERERQ 556
                .||..|:.:::.|..|:.||....::..:|......::.....:||        .|....:
 Frog   685 EMCRDHEEQLQRLKRLKDQEIDAVTSASSHTRSLNTVIEQMESFSHKLSDLSHRVESTQQTTSHE 749

  Fly   557 LEA----RERRLADQERRLKMDEETADDEKRRLMELVSTLELQLGRLSKESAEENWQLRQRMSSL 617
            ||.    ||.:|...:.:|...::..:.|:..|..:::.:|.:|...|:...:|.|::....:.:
 Frog   750 LETGARQREGQLRALQEQLSRQQKDMEQERNSLRMVITNMETRLIEQSRLLEQERWRVTSEQAKV 814

  Fly   618 EAERKAFEREKEFHREQMQRDEKRVEDLKALQLAEMERLHHDLQEERNQLTVERQQIELRQQLNE 682
            |:.:::.|.::....:||..:.:.:|..|:..|.|.:.:.....|||.:|..|......:|:|: 
 Frog   815 ESLQRSLEEQRRVVTQQMAIEREELERAKSALLEEQQSVMSRCTEERRKLAAEWSDFHTQQKLS- 878

  Fly   683 HGDPDRDRRELEAQLQVAREAIRRADEERD----RYHKLQREMEQRKRHLLDKEHALNLKEDELG 743
                 ::|.|.||...:.      |:.:|:    ...|.|.|::.:...||:||..|.|..:.:.
 Frog   879 -----KERAEKEANRVIV------AETQREGAIINLAKEQAELKIKASELLNKEEQLFLAREAME 932

  Fly   744 QATGAYRLATSR------------------QHLAEQKAREADQLL----------QAKLKVMAKR 780
            :.....||...|                  ..||.|:..|.::.|          |.:|:.:.::
 Frog   933 KERQDLRLEKERVNASALRVRQRAEEIESMSKLASQRYEEGEKALEEACKIESEHQGRLRAIQQK 997

  Fly   781 AQEIAEKEAQLAHERMLVAQDRMALVNLKKQISRSRCAICKMGAESAEIAQR-----RANVNPTA 840
            .:.:.::|..:..||:.:||.|..|..|::::..:.........|...:||.     :|...|.|
 Frog   998 LEILRQQEEHIHQERLSLAQQRRQLNQLQQELPTASVLFPARPPEPPLMAQNGKFTAKAIGIPAA 1062

  Fly   841 ATDLQLPQVTPSHAEL-LLKMSQEPGQVQSDIVDRMLDENIEASYRRMYNAPPSSSI 896
            ..:...||||..||:| |||||.:..:      |.:.:|.......|..|.|.|.::
 Frog  1063 LQETSKPQVTEFHAKLALLKMSAQQDR------DFLEEEQAFLETLRKPNLPWSQAV 1113

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5964NP_648507.1 PRK14971 <139..320 CDD:237874 47/209 (22%)
Smc 410..>743 CDD:224117 74/366 (20%)
SMC_prok_B 610..>882 CDD:274008 68/309 (22%)
fbf1XP_004918509.1 SCAB_CC <894..1004 CDD:293317 20/109 (18%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 156 1.000 Domainoid score I4120
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 157 1.000 Inparanoid score I4180
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0009885
OrthoInspector 1 1.000 - - oto103830
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X7598
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
55.050

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