DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Tim13 and tim8

DIOPT Version :10

Sequence 1:NP_648505.1 Gene:Tim13 / 39327 FlyBaseID:FBgn0036204 Length:92 Species:Drosophila melanogaster
Sequence 2:NP_592830.2 Gene:tim8 / 2542819 PomBaseID:SPAC13G6.04 Length:87 Species:Schizosaccharomyces pombe


Alignment Length:86 Identity:22/86 - (25%)
Similarity:42/86 - (48%) Gaps:18/86 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 MEKGELMNQVKQQIALANAQEMLSKMTEKCFKKCIQKPGKSLDSTEQRCISQCMDRFMDAWNLVS 70
            :|..:.:...:|::.|   |:.:.:.|..|:.|||...|..||.:|::|:..|::||:|.     
pombe    18 LELSKFIESEQQKVKL---QQAIHQFTSTCWPKCIGNIGNKLDKSEEQCLQNCVERFLDC----- 74

  Fly    71 RTYGNRLQREQYRTMESLEMT 91
                      .:..::|||.|
pombe    75 ----------NFHIIKSLEST 85

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tim13NP_648505.1 zf-Tim10_DDP 13..75 CDD:460764 17/61 (28%)
tim8NP_592830.2 zf-Tim10_DDP 22..84 CDD:460764 19/79 (24%)

Return to query results.
Submit another query.