DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tim13 and Timm13

DIOPT Version :9

Sequence 1:NP_648505.1 Gene:Tim13 / 39327 FlyBaseID:FBgn0036204 Length:92 Species:Drosophila melanogaster
Sequence 2:NP_665724.1 Gene:Timm13 / 252928 RGDID:628845 Length:95 Species:Rattus norvegicus


Alignment Length:76 Identity:50/76 - (65%)
Similarity:65/76 - (85%) Gaps:0/76 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 MEKGELMNQVKQQIALANAQEMLSKMTEKCFKKCIQKPGKSLDSTEQRCISQCMDRFMDAWNLVS 70
            ::.|.:|.|||.|||:|||||:|.:||:|||:|||.|||.|||::||:||:.||||:|||||.||
  Rat    17 LDPGAIMEQVKVQIAVANAQELLQRMTDKCFRKCIGKPGGSLDNSEQKCIAMCMDRYMDAWNTVS 81

  Fly    71 RTYGNRLQREQ 81
            |.|.:|||||:
  Rat    82 RAYNSRLQRER 92

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tim13NP_648505.1 zf-Tim10_DDP 13..73 CDD:281019 42/59 (71%)
Timm13NP_665724.1 zf-Tim10_DDP 24..84 CDD:397210 42/59 (71%)
Twin CX3C motif 46..69 15/22 (68%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166353770
Domainoid 1 1.000 103 1.000 Domainoid score I6620
eggNOG 1 0.900 - - E1_KOG1733
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H40846
Inparanoid 1 1.050 120 1.000 Inparanoid score I4678
OMA 1 1.010 - - QHG59611
OrthoDB 1 1.010 - - D1566384at2759
OrthoFinder 1 1.000 - - FOG0003493
OrthoInspector 1 1.000 - - otm45343
orthoMCL 1 0.900 - - OOG6_103836
Panther 1 1.100 - - O PTHR19338
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X2854
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
1615.770

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