DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Muc68D and CG13312

DIOPT Version :9

Sequence 1:NP_648504.2 Gene:Muc68D / 39326 FlyBaseID:FBgn0036203 Length:1514 Species:Drosophila melanogaster
Sequence 2:NP_648260.1 Gene:CG13312 / 39010 FlyBaseID:FBgn0035931 Length:342 Species:Drosophila melanogaster


Alignment Length:382 Identity:78/382 - (20%)
Similarity:124/382 - (32%) Gaps:117/382 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly  1107 SSTQGTPCTTDNPSSLEPSPSTPGNDDDSGNSG---SENGNSSTSGSPCTTDNPSDPESSSSTPG 1168
            ||||...|..|..|:..|:....|....||:||   ....::|.|.:.|...|..|...:.:..|
  Fly    43 SSTQMQSCQVDVLSTATPTDCPSGYVCVSGSSGVLCQPEDSASDSQADCQECNKCDETQTFACTG 107

  Fly  1169 NDDDSGNSGSENGNSS----TSGSPCTTDN------PSD---PESSSSTPGNDDDSGNSGSESGI 1220
            ....:...|::....|    .||..|..::      |:|   |..|.|     |||..:...|..
  Fly   108 TQSFALCLGTDTVQDSVGTCASGYVCNINDTQICGLPADGVMPTCSYS-----DDSTTTTVSSTT 167

  Fly  1221 TSTTGAPYTTDNPASQEPSPSAPENPGDSGNSSSESPPEGATPCTPNAPKKSTTSSYTA--HPTP 1283
            :|||.||                                         |..|:.|:|.|  ....
  Fly   168 SSTTAAP-----------------------------------------PSTSSASTYCAAVQSQG 191

  Fly  1284 KYTTEGNKAETSTLKSPTGTTPGHQEDRTDCSNMPNGIFLRDFQSCNKYYVC--LNGKAIAG--H 1344
            ||....|.                                  :.:|.:|..|  ::|..|..  .
  Fly   192 KYAVGYNA----------------------------------YTTCRQYIYCTLVDGSWIGQTYT 222

  Fly  1345 CPRNLHFDIKRKVC--NFPSLVDCPLDEAPENVTKKPSDTESTPD--CKSLRNGAY----VRDPK 1401
            ||.:::||...::|  ..||...   ..|..:.|...:.|.|.|:  |:::::..|    .....
  Fly   223 CPGSMYFDSASEMCVSTMPSTCS---TTATTSSTTTAAPTTSNPEAYCQAMQSAGYYPVGTDAST 284

  Fly  1402 SCSRFYVC-ANGRAIPRQ---CPQGLHFDIKSNFCNYPILVQCSLEESQADAHGALL 1454
            :|.::..| .||......   ||..|:::..|..|...:...||...:....:|.:|
  Fly   285 TCHQYIDCFLNGGTWGGNMYTCPGSLYYNSASRTCVSTLPSTCSTTVASLTLNGVVL 341

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Muc68DNP_648504.2 ChtBD2 21..69 CDD:214696
PHA03249 1088..>1209 CDD:223023 29/117 (25%)
CBM_14 1314..1366 CDD:279884 12/57 (21%)
CBM_14 1388..1440 CDD:279884 11/59 (19%)
ChtBD2 1459..1505 CDD:214696
CG13312NP_648260.1 None
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR23301
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
11.100

Return to query results.
Submit another query.