DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Muc68D and R02F2.4

DIOPT Version :9

Sequence 1:NP_648504.2 Gene:Muc68D / 39326 FlyBaseID:FBgn0036203 Length:1514 Species:Drosophila melanogaster
Sequence 2:NP_498171.1 Gene:R02F2.4 / 175755 WormBaseID:WBGene00019833 Length:431 Species:Caenorhabditis elegans


Alignment Length:404 Identity:102/404 - (25%)
Similarity:152/404 - (37%) Gaps:80/404 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly  1134 DSGNSGSEN-----GNSSTSGSPCTTDNPSDPESSSSTPGNDDDSGNSGSENGNSSTSGSPCTTD 1193
            :.|..|.||     |:..:||....|...|..||          ||:...||          ..:
 Worm    76 ECGEEGEENEFSGDGSGESSGDEEITFGDSSGES----------SGDELLEN----------VCE 120

  Fly  1194 NPSDPESSSSTPGNDDDSGNSGSESGITSTTGAPYTTDNPAS------QEPSPSAPENPGDSGNS 1252
            :..|...||.|..:.....||||...::.:|...|...|...      .|.|..:.|.....||.
 Worm   121 SLKDGVYSSGTCSSSYIICNSGSPRFLSCSTPLIYDPTNKKCSWKGMIDECSQVSGEYCESDGNI 185

  Fly  1253 SSESPPEGATPCTPN-APKKSTTSSYTAHPT------PKYTTEGNKAETSTLKSPTGTTPGHQED 1310
            |..........|:.. |.:::..::...:|.      ||...:.::      ||         |.
 Worm   186 SKSECSNVFFSCSEGIAHRRNCPANLVFNPAISSCDWPKNVMDCSE------KS---------EK 235

  Fly  1311 RTDCSNMPNGIFLRDFQSC-NKYYVCLNGKAIAGHCPRNLHFDIKRKVCNFPSLVD-CPLDEAPE 1373
            ..:|..: :|.|  .|..| :.:..|.||..|...||..|.|..|.::|::...|| |.|:.:..
 Worm   236 PQNCGEV-DGYF--SFGRCSSSFSACTNGIPIVMFCPDGLMFSEKNQMCDYEWNVDECDLESSGF 297

  Fly  1374 NVTKKPSDTESTPDCKSLRNGAYVRDPKSCS-RFYVCANGRAIPRQCPQGLHFDIKSNFCNYP-I 1436
            ....|.|  |:...|.::.||.|..|   |: |...|.|||....:||..|.|:..|..|:|| .
 Worm   298 MENYKAS--EALTPCTNMDNGLYALD---CTPRVLSCQNGRENIFECPPSLVFNENSLICDYPET 357

  Fly  1437 LVQCSLEESQADAHGALLAE----GVPDCTKVKEDTRFGDVKQHNKYYVCLKGKAVLHYCSPGN- 1496
            .::|.:|:       |||..    |..||:   .|..|........|:.|..|:.:.|.|:..| 
 Worm   358 SLKCCMED-------ALLIRDASIGTYDCS---IDGLFSSTLCSRNYHKCSNGQLIPHECADSNA 412

  Fly  1497 WFDLRSQKCIDQRL 1510
            .|...:.||:|..|
 Worm   413 VFSASAAKCVDSSL 426

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Muc68DNP_648504.2 ChtBD2 21..69 CDD:214696
PHA03249 1088..>1209 CDD:223023 19/79 (24%)
CBM_14 1314..1366 CDD:279884 17/53 (32%)
CBM_14 1388..1440 CDD:279884 19/53 (36%)
ChtBD2 1459..1505 CDD:214696 11/46 (24%)
R02F2.4NP_498171.1 CBM_14 25..74 CDD:279884
ChtBD2 117..165 CDD:214696 12/57 (21%)
CBM_14 185..229 CDD:279884 6/43 (14%)
ChtBD2 240..283 CDD:214696 14/45 (31%)
CBM_14 310..361 CDD:279884 19/53 (36%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D487374at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_109854
Panther 1 1.100 - - O PTHR23301
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
43.920

Return to query results.
Submit another query.