DRSC/TRiP Functional Genomics Resources

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Protein Alignment Gr68a and lite-1

DIOPT Version :10

Sequence 1:NP_524027.2 Gene:Gr68a / 39324 FlyBaseID:FBgn0041231 Length:389 Species:Drosophila melanogaster
Sequence 2:NP_509043.3 Gene:lite-1 / 180894 WormBaseID:WBGene00001803 Length:439 Species:Caenorhabditis elegans


Alignment Length:370 Identity:78/370 - (21%)
Similarity:140/370 - (37%) Gaps:110/370 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly   107 FRTLHDIAKIDEYLLANGFRETYS------------CRNLTILVTSAAGGVLAVAFYYIHYRSGI 159
            |.||....::.  :..||.||...            |..|.:|     .|:||....|.     :
 Worm    85 FTTLRKFNQVG--VRPNGTRENLQEFFANPRSMITLCNALIML-----SGLLASLQLYT-----L 137

  Fly   160 GAKR-QIILLLIYF-----------LQLLYSTLLALYLRTLMMNLA-----QRIGFLNQKLDTFN 207
            |||| :.:.:|..|           .|.:.:|.||::...|.:.:|     .:.|::...:.|.|
 Worm   138 GAKRLKPLKILCQFSLNVRTKQAERRQFMINTFLAVFSGLLALTMAATYAMSKWGYILYIVGTPN 202

  Fly   208 LQD----CGHMENW-----RELSNLIEVL----CKF--RYITENIN------------------- 238
            |..    |..::::     |...:.:.:|    |..  |.|...||                   
 Worm   203 LDTETIFCVLLDSYALFVSRAAISALAILFYQHCSVIRRSIKHLINEMVPAEQDECPLPESSLQK 267

  Fly   239 ---CVAGVSLLF--------YFGF-SFYT----VTNQSYLAFATLTAGSLSSKTEVADTIGLSCI 287
               |......:|        |:.| .||:    :....:|.|..::|.|: ..:||...:    |
 Worm   268 IHDCQISYQRIFNGKAVIEEYYSFVLFYSYGVCIPIFCFLMFVGMSAQSI-CWSEVVSIV----I 327

  Fly   288 WVLAETITMIVICSACDGLASEVNGTAQILA--RIYGKSKQFQNLID-------KFLTKSI-KQD 342
            |:: ..|.::::.|....:.:| :|...:.:  |:|.::  |....|       .|.|..| ...
 Worm   328 WIV-NAILVLLLFSLPAFMINE-DGDRLVASSFRMYHET--FHEERDLTVLSQMTFFTFQIHSTK 388

  Fly   343 LQFTAYGFFSIDNSTLFKIFSAVTTYLVILIQFKQLEDSKVEDIS 387
            |..:|..:|.:|.|.|..:|||:.||.:||.:|....:..:::|:
 Worm   389 LTLSACNYFYMDRSILLSLFSAILTYFLILWEFDIKNNQSLQNIA 433

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Gr68aNP_524027.2 7tm_7 7..379 CDD:462463 77/360 (21%)
lite-1NP_509043.3 7tm_7 75..425 CDD:462463 77/360 (21%)

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