DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG32087 and VMP1

DIOPT Version :9

Sequence 1:NP_729740.2 Gene:CG32087 / 39323 FlyBaseID:FBgn0052087 Length:407 Species:Drosophila melanogaster
Sequence 2:NP_001316324.1 Gene:VMP1 / 81671 HGNCID:29559 Length:419 Species:Homo sapiens


Alignment Length:418 Identity:181/418 - (43%)
Similarity:259/418 - (61%) Gaps:55/418 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MAASNDTEAGHSSLPSEIDRLAELVQERLEWKSLVLWRRPVQTLKYGGLEAGHLLLSFIEKLLNL 65
            :|.:.:...|:.:.||.::....  :||.|.:::||||:|:.||:|..||   :|:...|....|
Human    13 VAMNKEHHNGNFTDPSSVNEKKR--REREERQNIVLWRQPLITLQYFSLE---ILVILKEWTSKL 72

  Fly    66 W-----LVGGLLLLGMFC---LLPGPHADFVIFCKHRFGFAVYWLGLGVLSSVGFGTGLHTFLLY 122
            |     :|..||||.:..   .:.|.|..:|...:.:|....||:|||:|||||.||||||||||
Human    73 WHRQSIVVSFLLLLAVLIATYYVEGVHQQYVQRIEKQFLLYAYWIGLGILSSVGLGTGLHTFLLY 137

  Fly   123 LGPHLAAVTLAAYECQTLDFPTPPYPDIKVCPQEPYKRNYPDVWQILAKVRPEALLWGIGTALGE 187
            ||||:|:||||||||.:::||.|||||..:||.|........:|.|::|||.||.:||||||:||
Human   138 LGPHIASVTLAAYECNSVNFPEPPYPDQIICPDEEGTEGTISLWSIISKVRIEACMWGIGTAIGE 202

  Fly   188 LPPYFMTRRARLSGKELDGAEEEKLLDERRRCGKLGMLDH----------AKLFMERVMRRVGFM 242
            ||||||.|.|||||.|.|..|.::..:         ||:|          |||.:::::::|||.
Human   203 LPPYFMARAARLSGAEPDDEEYQEFEE---------MLEHAESAQDFASRAKLAVQKLVQKVGFF 258

  Fly   243 GILFCASVPNPLFDLAGITCGHFLVPFWKFFVATLIGKALIKATIQQLFVIASLTESLVDRFVVG 307
            |||.|||:||||||||||||||||||||.||.|||||||:||..||::|||.:.::.:|::.|..
Human   259 GILACASIPNPLFDLAGITCGHFLVPFWTFFGATLIGKAIIKMHIQKIFVIITFSKHIVEQMVAF 323

  Fly   308 LG-------------KLPYLGPPMQRMIRELLQSTKQQMH-----GTVNSNSLAYLSHLVRAFEL 354
            :|             .:|.:||.:|:..:|.|::.:|::|     ||....:  :||.:   ||.
Human   324 IGLEDNGALQPPPPSAVPGIGPSLQKPFQEYLEAQRQKLHHKSEMGTPQGEN--WLSWM---FEK 383

  Fly   355 CAFIMVTCFVVSSLNCLAQIHCKRQQEK 382
            ...:||..|::|.:|.:||.:.||.|::
Human   384 LVVVMVCYFILSIINSMAQSYAKRIQQR 411

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG32087NP_729740.2 SNARE_assoc <233..282 CDD:294297 37/48 (77%)
VMP1NP_001316324.1 SNARE_assoc <247..298 CDD:294297 37/50 (74%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C165160281
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1109
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG54823
OrthoDB 1 1.010 - - D468248at33208
OrthoFinder 1 1.000 - - FOG0003786
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_103371
Panther 1 1.100 - - O PTHR10281
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X2641
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
User_Submission 00.000 Not matched by this tool.
109.720

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