DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG32087 and Vmp1

DIOPT Version :9

Sequence 1:NP_729740.2 Gene:CG32087 / 39323 FlyBaseID:FBgn0052087 Length:407 Species:Drosophila melanogaster
Sequence 2:NP_001343460.1 Gene:Vmp1 / 75909 MGIID:1923159 Length:406 Species:Mus musculus


Alignment Length:405 Identity:183/405 - (45%)
Similarity:256/405 - (63%) Gaps:42/405 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MAASNDTEAGHSSLPSEIDRLAELVQERLEWKSLVLWRRPVQTLKYGGLEAGHLLLSFIEKLLNL 65
            :|.|.|...|..:.||.:.....  ::|.|.:::||||:|:.||:|..||...:|..:..|   |
Mouse    13 IAMSKDQHNGSLTDPSSVHEKKR--RDREERQNIVLWRQPLITLQYFSLETLVVLKEWTSK---L 72

  Fly    66 W-----LVGGLLLLGMFC---LLPGPHADFVIFCKHRFGFAVYWLGLGVLSSVGFGTGLHTFLLY 122
            |     :|..||||....   .:.|.|..:|...:.:|....||:|||:|||||.||||||||||
Mouse    73 WHRQSIVVSFLLLLAALVATYYVEGAHQQYVQRIEKQFLLYAYWIGLGILSSVGLGTGLHTFLLY 137

  Fly   123 LGPHLAAVTLAAYECQTLDFPTPPYPDIKVCPQEPYKRNYPDVWQILAKVRPEALLWGIGTALGE 187
            ||||:|:||||||||.:::||.|||||..:||:|........:|.|::|||.||.:||||||:||
Mouse   138 LGPHIASVTLAAYECNSVNFPEPPYPDQIICPEEEGAEGAISLWSIISKVRIEACMWGIGTAIGE 202

  Fly   188 LPPYFMTRRARLSGKELDGAEEEKLLDERRRCGKLGMLDH----------AKLFMERVMRRVGFM 242
            ||||||.|.|||||.|.|..|.::..:         ||:|          |||.:::::::|||.
Mouse   203 LPPYFMARAARLSGAEPDDEEYQEFEE---------MLEHAEAAQDFASRAKLAVQKLVQKVGFF 258

  Fly   243 GILFCASVPNPLFDLAGITCGHFLVPFWKFFVATLIGKALIKATIQQLFVIASLTESLVDRFVVG 307
            |||.|||:||||||||||||||||||||.||.|||||||:||..||::|||.:.::.:|::.|..
Mouse   259 GILACASIPNPLFDLAGITCGHFLVPFWTFFGATLIGKAIIKMHIQKIFVIVTFSKHIVEQMVTF 323

  Fly   308 LGKLPYLGPPMQRMIRELLQSTKQQMH-----GTVNSNSLAYLSHLVRAFELCAFIMVTCFVVSS 367
            :|.:|.:||.:|:..:|.|::.:|::|     ||....:  :||.:   ||.....||..||:|.
Mouse   324 IGAVPGIGPSLQKPFQEYLEAQRQKLHHRSEAGTPQGEN--WLSWM---FEKLVVAMVCYFVLSI 383

  Fly   368 LNCLAQIHCKRQQEK 382
            :|.:||.:.||.|::
Mouse   384 INSMAQNYAKRIQQR 398

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG32087NP_729740.2 SNARE_assoc <233..282 CDD:294297 37/48 (77%)
Vmp1NP_001343460.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..37 6/25 (24%)
VTT domain. /evidence=ECO:0000250|UniProtKB:Q96GC9 173..316 81/151 (54%)
SNARE_assoc <247..298 CDD:412374 37/50 (74%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167850633
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1109
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG54823
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0003786
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_103371
Panther 1 1.100 - - O PTHR10281
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X2641
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
109.710

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