DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Bmcp and Slc25a20

DIOPT Version :10

Sequence 1:NP_648501.1 Gene:Bmcp / 39322 FlyBaseID:FBgn0036199 Length:303 Species:Drosophila melanogaster
Sequence 2:NP_065266.1 Gene:Slc25a20 / 57279 MGIID:1928738 Length:301 Species:Mus musculus


Alignment Length:313 Identity:81/313 - (25%)
Similarity:130/313 - (41%) Gaps:35/313 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 EVKDWRPF---VYGGVASITAEFGTFPIDTTKTRLQIQGQKIDQSFSQLRYRGMTDAFVKISREE 64
            |.|...||   :.||...:...|...|:||.|.|||.|...:  |.....|.|..|.|.|....|
Mouse     4 EPKPISPFKNLLAGGFGGMCLVFVGHPLDTVKVRLQTQPPSL--SGQPPMYSGTLDCFRKTLMRE 66

  Fly    65 GLRALYSGIWPAVLRQATYGTIKFGTYYTLKKLANERGLLINEDGSERVWSNILCAA-AAGAISS 128
            |:..||.|:...::.......:.|..:...|||..:.    .||  |..:..:..|. .:|..::
Mouse    67 GITGLYRGMAAPIIGVTPMFAVCFFGFGLGKKLQQKS----PED--ELSYPQLFTAGMLSGVFTT 125

  Fly   129 AIANPTDVLKVRMQVH---GKGQHKGLLGCFGEIYKYEGVRGLWRGVGPTAQRAVVIASVELPVY 190
            .|..|.:.:|..:|:.   |:.::.|.|.|..::|:..|:||.::|...|..|.|..:.:....|
Mouse   126 GIMTPGERIKCLLQIQASSGENKYSGTLDCAKKLYQEFGIRGFYKGTVLTLMRDVPASGMYFMTY 190

  Fly   191 DFCKLQLMNAFGDHVGNHFISSFIASLGSA-----IASTPIDVIRTRLMNQRPVSITMNGVVTAA 250
            ::.| .|....|..|.:..:...:.:.|.|     ..:.|.||:::|.....|            
Mouse   191 EWLK-NLFTPEGKSVSDLSVPRILVAGGFAGIFNWAVAIPPDVLKSRFQTAPP------------ 242

  Fly   251 ATPKLYSGSLDCAVQTIRNEGLPALYKGFIPTWVRMGPWNIIFFITYEQLKKY 303
              .|..:|..|...:.||.||:.:|||||....:|..|.|...|:.:|...|:
Mouse   243 --GKYPNGFRDVLRELIREEGVTSLYKGFNAVMIRAFPANAACFLGFEIAMKF 293

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
BmcpNP_648501.1 Mito_carr 7..97 CDD:395101 26/92 (28%)
Mito_carr <132..199 CDD:395101 18/69 (26%)
Mito_carr 204..303 CDD:395101 25/103 (24%)
Slc25a20NP_065266.1 Mito_carr 6..103 CDD:395101 29/98 (30%)
Solcar 1 8..99 26/92 (28%)
Mito_carr 106..198 CDD:395101 23/94 (24%)
Solcar 2 108..196 20/88 (23%)
Mito_carr 205..294 CDD:395101 25/103 (24%)
Solcar 3 207..293 24/99 (24%)

Return to query results.
Submit another query.