Protein Alignment Bmcp and Shawn

DIOPT Version :10

• Sequence 1: NP_648501.1
• Gene: Bmcp / 39322
• FlyBaseID: FBgn0036199
• Length: 303
• Species: Drosophila melanogaster
• Sequence 2: NP_001027071.1
• Gene: Shawn / 3772641
• FlyBaseID: FBgn0031039
• Length: 387
• Species: Drosophila melanogaster
• Alignment Length: 336
• Identity: 87/336 - (25%)
• Similarity: 139/336 - (41%)
• Gaps: 67/336 - (19%)

  Fly    16 ASITAEFGTFPIDTTKTRLQIQGQKIDQSFSQL--------------------------RYRGMT 54
            |.:||.|.| |:|..|||||.|.|.:..:...|                          |:.|..
  Fly    50 AMVTACFMT-PLDVIKTRLQAQQQALLSNKCFLYCNGLMDHICPCGPDTPNPAAAKPAPRFSGTI 113

  Fly    55 DAFVKISREEGLRALYSGIWPAVLRQATYGTIKFGTYYTLK--------KLANERGLLINEDGSE 111
            |||:||||.||:.:|:||:.|.::.......|.|..|...|        |.......:.::....
  Fly   114 DAFIKISRTEGIGSLWSGLSPTLISALPSTIIYFVAYEQFKARFTDIHYKYTRRPDTIAHDIPHP 178

  Fly   112 RVWSNILCAAAAGAI-SSAIANPTDVLKVRMQVHGKGQHKGLLGCFGEIYKYEGVRGLWRGVGPT 175
            ..:...|.|..:|.| :....:|.::::.:||.. :..|..:.|...::.:.:||.|||||:.||
  Fly   179 IPFLVPLLAGVSGRILAVTCVSPVELIRTKMQSQ-RMTHAEMFGTIRQVVQSQGVLGLWRGLPPT 242

  Fly   176 AQRAVVIASVELPVYDFCKLQLMNAFGDHVGNHFISSFIASL--GSAIA--STPIDVIRTR---- 232
            ..|.|..:.:....|::.|    ::|| .|...|..||.|..  ||..|  :||.||::|.
  Fly   243 ILRDVPFSGIYWTCYEYLK----SSFG-VVEPTFSFSFAAGAISGSVAATITTPFDVVKTHEQIE 302

  Fly   233 -----LMNQRPVSITMNGVVTAAATPKLYSGSLDCAVQTIRNEGLPALYKGFIPTWVRMGPWNII 292
                 :.:..|    ...|.|.:...:|.|        ..|..|:||::.|..|...::.|...|
  Fly   303 FGEKFIFSDNP----PKQVATKSVAMRLAS--------IYRMGGVPAIFSGLGPRLFKVAPACAI 355

  Fly   293 FFITYEQLKKY 303
            ...::|..|.:
  Fly   356 MISSFEYGKSF 366

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Bmcp	NP_648501.1	Mito_carr	7..97	CDD:395101	34/114 (30%)
		Mito_carr	<132..199	CDD:395101	18/66 (27%)
		Mito_carr	204..303	CDD:395101	28/111 (25%)
Shawn	NP_001027071.1	Mito_carr	39..159	CDD:395101	34/109 (31%)
		Mito_carr	178..265	CDD:395101	22/91 (24%)
		Mito_carr	268..371	CDD:395101	27/111 (24%)