DRSC/TRiP Functional Genomics Resources

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Protein Alignment Bmcp and colt

DIOPT Version :9

Sequence 1:NP_648501.1 Gene:Bmcp / 39322 FlyBaseID:FBgn0036199 Length:303 Species:Drosophila melanogaster
Sequence 2:NP_477221.1 Gene:colt / 33470 FlyBaseID:FBgn0019830 Length:306 Species:Drosophila melanogaster


Alignment Length:306 Identity:82/306 - (26%)
Similarity:129/306 - (42%) Gaps:34/306 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 RPFVYGGVASITAEFGTFPIDTTKTRLQIQGQKIDQSFSQLRYRGMTDAFVKISREEGLRALYSG 72
            :.|:.||...|.......|:||.|.|||...:....  .|..|||..|...|..:.||:|.||.|
  Fly    17 KSFLTGGFGGICNVLSGHPLDTIKVRLQTMPRPAPG--EQPLYRGTFDCAAKTIKNEGVRGLYKG 79

  Fly    73 IWPAVLRQATYGTIKFGTYYTLKKLANERGLLINEDGSERVWSNILCAAA-AGAISSAIANPTDV 136
            :...:...|....:.|.. |.|.|...:||    || ::..:..|..|.: :|..|:.|..|.:.
  Fly    80 MSAPLTGVAPIFAMCFAG-YALGKRLQQR
G----ED-AKLTYPQIFVAGSFSGLFSTLIMAPGER 138

  Fly   137 LKVRMQVH----GKGQHKGLLGCFGEIYKYEGVRGLWRGVGPTAQRAVVIASVELPVYDFCKLQL 197
            :||.:|..    |:.::.|::.|.|::||..|:|.:::|...|..|.:....:...||:  .||.
  Fly   139 IKVLLQTQQGQGGERKYNGMIDCAGKLYKEGGLRSVFKGSCATMLRDLPANGLYFLVYE--ALQD 201

  Fly   198 MNAFGDHVGNHFISSFIASLGSA-----IASTPIDVIRTRLMNQRPVSITMNGVVTAAATPKLYS 257
            :.......|....:|.|.:.|.|     |...|.||:::||.: .|.....:|:.:...      
  Fly   202 V
AKSKSETGQISTASTIFAGGVAGMAYWILGMPADVLKSRLQS-APEGTYKHGIRSVFK------ 259

  Fly   258 GSLDCAVQTIRNEGLPALYKGFIPTWVRMGPWNIIFFITYEQLKKY 303
                   ..|..:|..|||:|..|..:|..|.|...|...|...|:
  Fly   260 -------DLIVKDGPLALYRGVTPIMLRAFPANAACFFGIELANKF 298

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
BmcpNP_648501.1 Mito_carr 7..97 CDD:278578 27/88 (31%)
Mito_carr <132..199 CDD:278578 19/70 (27%)
Mito_carr 204..303 CDD:278578 25/103 (24%)
coltNP_477221.1 Mito_carr 12..107 CDD:395101 28/92 (30%)
Mito_carr 112..202 CDD:395101 24/91 (26%)
Mito_carr 210..299 CDD:395101 26/103 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45441764
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
21.840

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