DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Bmcp and misc-1

DIOPT Version :9

Sequence 1:NP_648501.1 Gene:Bmcp / 39322 FlyBaseID:FBgn0036199 Length:303 Species:Drosophila melanogaster
Sequence 2:NP_493694.2 Gene:misc-1 / 173414 WormBaseID:WBGene00015186 Length:306 Species:Caenorhabditis elegans


Alignment Length:308 Identity:97/308 - (31%)
Similarity:152/308 - (49%) Gaps:32/308 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 GEVKDWRPFVYGGVASITAEFGTFPIDTTKTRLQIQGQKIDQSFSQLRYRGMTDAFVKISREEGL 66
            |.|.:...|.:||.|.:.|.....|:|..|.|:|:.|     :..:..||....|...|.:.||:
 Worm     5 GGVPNVVKFAFGGTAGMGATLVVQPLDLVKNRMQLSG-----TTGKKEYRSSMHALTSIMKNEGV 64

  Fly    67 RALYSGIWPAVLRQATYGTIKFGTYYTLKKLANERGLLINEDGSERVWSNILCAAAAGAISSAIA 131
            .|:|:|:...:||||||.|.:.|||..|.:...|:      |.........:....||.|.|.:.
 Worm    65 FAVYNGLSAGLLRQATYTTTRLGTYAFLLERFTEK------DKPLSFGMKAVLGMTAGGIGSFVG 123

  Fly   132 NPTDVLKVRM------QVHGKGQHKGLLGCFGEIYKYEGVRGLWRGVGPTAQRAVVIASVELPVY 190
            .|.::..:||      .|..:..:.|::.....|.|.|||..||||..||..||:|:.:.:|..|
 Worm   124 TPAEIALIRMTGDGRLPVEQRRNYTGVVNALTRITKEEGVLTLWRGCTPTVLRAMVVNAAQLATY 188

  Fly   191 DFCKLQLMNAFG---DHVGNHFISSFIASLGSAIASTPIDVIRTRLMNQRPVSITMNGVVTAAAT 252
            ...| |.:.|.|   |.:..||::|.|:.|.:.|||.|:|:.:||:.:.:.:.          ..
 Worm   189 SQAK-QALLASGKVQDGIFCHFLASMISGLATTIASMPVDIAKTRIQSMKVID----------GK 242

  Fly   253 PKLYSGSLDCAVQTIRNEGLPALYKGFIPTWVRMGPWNIIFFITYEQL 300
            |: |..:.|...:.|:|||:.||:|||.|.::|:||..::.||..||:
 Worm   243 PE-YKNAFDVWGKVIKNEGIFALWKGFTPYYMRLGPHTVLTFIILEQM 289

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
BmcpNP_648501.1 Mito_carr 7..97 CDD:278578 31/89 (35%)
Mito_carr <132..199 CDD:278578 23/72 (32%)
Mito_carr 204..303 CDD:278578 32/97 (33%)
misc-1NP_493694.2 Mito_carr 7..99 CDD:278578 32/96 (33%)
Mito_carr 101..196 CDD:278578 27/95 (28%)
Mito_carr 202..296 CDD:278578 33/99 (33%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG0759
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG54059
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R857
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
54.850

Return to query results.
Submit another query.