DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ccdc56 and coa-3

DIOPT Version :10

Sequence 1:NP_996062.3 Gene:Ccdc56 / 39320 FlyBaseID:FBgn0261353 Length:87 Species:Drosophila melanogaster
Sequence 2:NP_001370702.1 Gene:coa-3 / 173796 WormBaseID:WBGene00018046 Length:133 Species:Caenorhabditis elegans


Alignment Length:64 Identity:24/64 - (37%)
Similarity:43/64 - (67%) Gaps:2/64 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly    19 LDKAQLQFMKLIEEQNLDRVQKL-KRIRRNNLLTAGALGVSVLAIYGYSIFSVQQEKFLDDFEE 81
            |.:.|.:|.|..|:.|.:||::: .:..:|::..|..||| |:.||.|:::||:||.||::.:|
 Worm    55 LPRPQKRFAKQFEKVNQERVKEIFAKNYKNHISFAVLLGV-VIGIYWYTMYSVKQETFLEEIDE 117

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ccdc56NP_996062.3 Coa3_cc 34..82 CDD:462910 19/49 (39%)
coa-3NP_001370702.1 Coa3_cc 70..118 CDD:462910 19/49 (39%)

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