DRSC/TRiP Functional Genomics Resources

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Protein Alignment Dnai2 and dync1i2a

DIOPT Version :10

Sequence 1:NP_001261723.1 Gene:Dnai2 / 39318 FlyBaseID:FBgn0036195 Length:585 Species:Drosophila melanogaster
Sequence 2:NP_001429003.1 Gene:dync1i2a / 767729 ZFINID:ZDB-GENE-060929-1086 Length:626 Species:Danio rerio


Alignment Length:599 Identity:127/599 - (21%)
Similarity:227/599 - (37%) Gaps:142/599 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 KKERRSFGARVHFEDKDEVVFTENSNPE--------LVKSYILKNPVDRVTQYAGQTSLSVANTE 62
            ::||:...|.:   .||.|...::|:.|        |::|..:.:.|.........|:.||.:..
Zfish    29 EEERKKKEAEL---KKDAVPLQDDSDLEKKRREADALLQSMGITSDVSAAPAPMSPTAKSVGSPS 90

  Fly    63 RATYKSTG------------------ITHNE-GGWPKDINM-------HDPEQTVRY-------- 93
            .|..:.:|                  :.|:| |..|..:.|       ..|::.|.|        
Zfish    91 EAGSQDSGDGTTGPRTLHWDCDPSTVLLHSELGRGPLKLAMTKMTHVDFPPKEVVSYTKETQTPT 155

  Fly    94 --KRKIEKDENYITQV------MNLTKPME--------HYIHQNNAVNIY--ENYFENLDPAP-L 139
              ::|.|:||...|..      ....||.|        |.:.:...:.|.  |.:.:..|.:. :
Zfish   156 MTEQKDEEDEEEETPAAQPEAETEKEKPEEKQVEEALPHELTEEEKLQILHSEEFMDFFDHSTRI 220

  Fly   140 PEPCKSRTVNVYRDPNPIKVPVKHLSWSPDGGIKMAVSHCDMRFQGDK-SNQK---C-------- 192
            .|...|..|:|:.|.:...:..|  ......|.|::::.   :|..|: |.|:   |        
Zfish   221 VERALSEHVDVFFDYSGRDMEEK--EGEMQAGTKLSLNR---KFVDDRWSKQRVVTCLDWSPQYP 280

  Fly   193 ----NSYIWEVENPNEPFLTLEPKVPCVCLEYNQK------------------------DPTSLV 229
                .||....|.|:||        ..|.|.:|.|                        .|..:|
Zfish   281 ELLVASYNNNEEAPHEP--------DGVALVWNMKYKKATPEYVFHCQSAVMSAAFAKFHPNLVV 337

  Fly   230 SGMYNGQVAAWDTR-HGKLPVMISE-REVCHRDPVNSVLWNNSKSGTEFFSGGSDGQVLWWDTRK 292
            .|.|:||:..||.| :.:.||..:. ....|..||..|....:::.....|..:||::..|....
Zfish   338 GGTYSGQIVLWDNRSNRRTPVQRTPLSAAAHTHPVYCVNVVGTQNAHNLISISTDGKMCSWSLDM 402

  Fly   293 LTEPLDRLLMDPVKSDDQDLSRSYGISVLEYETTIPTRFMAGTEMGMLFSCNRKGKTPTEKIQIR 357
            |::|.|.  |:.|...    |:|..::.:.:.......|:.|:|.|.:::.:|.|    .:..|.
Zfish   403 LSQPQDS--MELVFKQ----SKSVAVTSMSFPLGDVNNFVVGSEDGSVYTASRHG----SRAGIS 457

  Fly   358 MMC--HLGPVYAITRNPA-----FVKNFLTVG-DWCARIWSEDCRESSIIWT-KSSSSMLTDGAW 413
            .|.  |.||:..|..:.|     |...|||.. ||..::||.  :.:..::: :.:|..:.|..|
Zfish   458 EMFEGHHGPITGIHCHTAAGPVDFSHLFLTASFDWTVKLWSN--KNNKPLYSFEDNSDYVYDVMW 520

  Fly   414 SYTKVSQFFITRMDGVLDTWDLLQQQNEPVLTVKVCDEP-LYCVRTNENGKFVSCGSQLGATFLV 477
            |....:.|......|.:|.|:|......|..:|.|...| |..:|.:::|:.::.|...|...:.
Zfish   521 SPVHPALFACVDGLGRVDLWNLNNDTEVPTASVAVDGSPALNRLRWSQSGREIAVGDSEGQIHIY 585

  Fly   478 EVSDNMVMSAKNDK 491
            :|.:.:.: .:||:
Zfish   586 DVGEQIAV-PRNDE 598

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Dnai2NP_001261723.1 WD40 212..469 CDD:475233 67/292 (23%)
WD40 repeat 215..254 CDD:293791 15/64 (23%)
WD40 repeat 262..304 CDD:293791 10/41 (24%)
WD40 repeat 318..355 CDD:293791 6/36 (17%)
WD40 repeat 365..401 CDD:293791 10/41 (24%)
WD40 repeat 408..433 CDD:293791 6/24 (25%)
WD40 repeat 162..208 CDD:293791 14/61 (23%)
dync1i2aNP_001429003.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 20..108 16/81 (20%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 142..197 11/54 (20%)
WD 1. /evidence=ECO:0000255 265..314 13/56 (23%)
WD 2. /evidence=ECO:0000255 318..358 9/39 (23%)
WD 3. /evidence=ECO:0000255 367..408 10/40 (25%)
WD 4. /evidence=ECO:0000255 417..457 8/43 (19%)
WD 5. /evidence=ECO:0000255 462..507 13/46 (28%)
WD 6. /evidence=ECO:0000255 510..550 9/39 (23%)
WD 7. /evidence=ECO:0000255 556..595 7/39 (18%)

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