DRSC/TRiP Functional Genomics Resources

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Protein Alignment Dnai2 and Dnai1

DIOPT Version :9

Sequence 1:NP_001261723.1 Gene:Dnai2 / 39318 FlyBaseID:FBgn0036195 Length:585 Species:Drosophila melanogaster
Sequence 2:NP_001019513.1 Gene:Dnai1 / 500442 RGDID:1565671 Length:705 Species:Rattus norvegicus


Alignment Length:442 Identity:92/442 - (20%)
Similarity:174/442 - (39%) Gaps:68/442 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly    88 EQTVRYKRKIEKDENYITQVMNLTKPMEHYIHQNNAVNIYEN--YFENLDPAPLPEPCKSRTVNV 150
            :..:|....:|...:.||:|....|.:|..::||...::.::  |:|:             ..:.
  Rat   265 KMAMRKLTSMESQSDDITKVTQAAKIVERMVNQNTYDDVAQDFKYYED-------------AADE 316

  Fly   151 YRDPNPIKVP-------------VKHLSWSPDGGIKMAVSHCDMRFQGDKSNQKCNSYIWEVENP 202
            |||.....:|             |..|.|:|......||.|....|.   ...:....::.::||
  Rat   317 YRDQEGTLLPLWKFQNDKAKRLAVTALCWNPKYKDLFAVGHGSYDFM---KQSRGMLLLYSMKNP 378

  Fly   203 NEPFLTLEPKVPCVCLEYNQKDPTSLVSGMYNGQVAAWDTR--HGKLPVMISEREVCHRDPVNSV 265
            :.|......:...:||:.:...|..:|.|.|:|.||.::.:  |.:.....:.:...|.|||..|
  Rat   379 SFPEYMFSSESGIMCLDMHMDHPYLVVVGYYDGNVAIYNLKKPHSQPCFRSTSKSGKHTDPVWQV 443

  Fly   266 LW--NNSKSGTEFFSGGSDGQVLWWDTRKLTEPLDRLLMDPVKSDDQDLSRSY--GI-------- 318
            .|  ::......|||..|||:::.|...|    .:.:.:|.:|..|:..:...  |:        
  Rat   444 KWQKDDMDHNLNFFSVSSDGRIVSWTLVK----SELVHIDVIKLKDEGSTTEIPEGLQLHTVGCG 504

  Fly   319 SVLEYETTIPTRFMAGTEMGMLFSCNRKGKTPTEKIQIRMMCHLGPVYAITRNPAFVKNFLTV-G 382
            :..::...|...|:.|||.|.::.|:   |:.:.:.......|...|.|:..||...:.|::. .
  Rat   505 TAFDFHKEIDYLFLVGTEEGKIYKCS---KSYSSQFLDTYDAHNMAVDAVLWNPYHARVFISCSS 566

  Fly   383 DWCARIWSEDCRESSIIWTKSSSSMLTDGAWSYTKVSQFFITRMDGVLDTWDLLQQQNEPVLTVK 447
            ||..:||....:....|:..:::  :.|.||:....:.|.....||....:||...:.|     .
  Rat   567 DWTVKIWDHAIKTPMFIYDLNAA--VGDVAWAPYSSTVFAAVTTDGKAHVFDLAVNKYE-----A 624

  Fly   448 VCDEPLYC--------VRTNENGKFVSCGSQLGATFLVEVSDNMVMSAKNDK 491
            :|::|:..        |:.|.....:..|...|....:::|.|:....|..|
  Rat   625 ICNQPVVAKKKNKITHVQFNPIHPIIIVGDDRGHITCLKLSPNLRKMPKEKK 676

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Dnai2NP_001261723.1 WD40 <160..482 CDD:225201 75/357 (21%)
WD40 repeat 162..208 CDD:293791 10/45 (22%)
WD40 212..469 CDD:295369 60/279 (22%)
WD40 repeat 215..254 CDD:293791 10/40 (25%)
WD40 repeat 262..304 CDD:293791 11/43 (26%)
WD40 repeat 318..355 CDD:293791 8/44 (18%)
WD40 repeat 365..401 CDD:293791 10/36 (28%)
WD40 repeat 408..433 CDD:293791 6/24 (25%)
Dnai1NP_001019513.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..44
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 122..169
WD40 325..683 CDD:225201 78/369 (21%)
WD40 repeat 340..386 CDD:293791 11/48 (23%)
WD40 <358..616 CDD:295369 57/269 (21%)
WD 1 386..426 10/39 (26%)
WD40 repeat 392..433 CDD:293791 10/40 (25%)
WD 2 435..478 14/46 (30%)
WD40 repeat 440..494 CDD:293791 14/57 (25%)
WD40 repeat 505..542 CDD:293791 8/39 (21%)
WD 3 543..583 10/39 (26%)
WD40 repeat 548..587 CDD:293791 10/38 (26%)
WD 4 585..625 9/46 (20%)
WD40 repeat 590..631 CDD:293791 11/45 (24%)
WD 5 633..672 6/38 (16%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1587
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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