DRSC/TRiP Functional Genomics Resources

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Protein Alignment Dnai2 and LOC4576277

DIOPT Version :10

Sequence 1:NP_001261723.1 Gene:Dnai2 / 39318 FlyBaseID:FBgn0036195 Length:585 Species:Drosophila melanogaster
Sequence 2:XP_001237748.2 Gene:LOC4576277 / 4576277 VectorBaseID:AGAMI1_000491 Length:693 Species:Anopheles gambiae


Alignment Length:541 Identity:122/541 - (22%)
Similarity:206/541 - (38%) Gaps:120/541 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 KERRSFGARVHFED---KDEVVFTENSNPELVKSYILK-------NPVDRVTQYAGQTSLSVANT 61
            |.||:..|.....|   |...|.||..:.:.|.|::..       |.::|.|:     .::||::
Mosquito   169 KARRTADAEAQTRDLPCKSRSVNTECIHRQDVASFVSNYDMYDTYNDLERHTK-----EINVADS 228

  Fly    62 ----ERATYKSTGITHNEGGWPKDINMHDPEQTVRYKRKIEKDENYITQVMNLTKPMEHYIHQNN 122
                |..||...|:        :||:           .::.::.|:....|.|.:.:        
Mosquito   229 ASKLEITTYSREGM--------EDID-----------ERLNRNANFHLSSMILQRLL-------- 266

  Fly   123 AVNIYENY---FENLDPAPLPEPCKS--------RTVNVYRDPNPIKVPVKHLSWSPDGGIKMAV 176
            |.|:|...   |.|:.|   |:||:.        ..:..||....:..||...||.|..|..:|:
Mosquito   267 AGNVYREQQIRFRNMYP---PDPCREDIRYLYRLDVLWTYRTVETLGKPVASASWCPANGDIVAL 328

  Fly   177 SHCDMRFQGDKSNQKCN-SYIWEVENPNEPFLTLEPKVPCVCLEYNQKDPTSLVSGMYNGQVAAW 240
            ::......| ..::.|. .|:|.::||..|........|..|:.::::.|..|..|:|:|:|...
Mosquito   329 AYGIYGHTG-SDDRGCGFVYVWNIKNPVNPERRYRFDCPVTCVAFSRRTPQLLAVGLYDGRVQVR 392

  Fly   241 D-TRHGKLPVMISEREVCHRDPVNSVLWNNSKSGTEFFSGGSD------------------GQVL 286
            | |...:.|:.:|.|:   |.||...:|:  ....||.:.|.|                  ||.|
Mosquito   393 DITDTTQTPLAVSNRD---RFPVYQPIWD--LKWVEFDNEGKDEVIAVSQNGWVMKYTLTIGQYL 452

  Fly   287 WWDTRKLTEPLDRLLMDPVK--------------SDDQDLSRSYGISVLEYETTI----PTRFMA 333
                  |..||.||  |.|:              :|.|.:.....:.......||    ..::..
Mosquito   453 ------LPYPLLRL--DRVEGTPEGQTSTGTSAPADQQPVRVQSDLHPQALCVTIHPVQKDKYYI 509

  Fly   334 GTEMGMLFSCNRKGKTPTEKIQIRMMCHLGPVYAITRNPAFVKNFLTV-GDWCARIWSEDCRESS 397
            ||:.|.:..|:.  ..|.:.:.:..| |...::.:..:|...:.|||. |||..|||.|:..| .
Mosquito   510 GTDEGAVHWCSI--NDPFQHLGVLQM-HSRGIFCLEYSPWSPRIFLTCSGDWSIRIWIEELPE-P 570

  Fly   398 IIWTKSSSSMLTDGAWSYTKVSQFFITRMDGVLDTWDLLQQQNEPV--LTVKVCDEPLYCVRTNE 460
            |:...:..:.:....||.|..:........|| ..|||.::.::|.  .|:......|..||...
Mosquito   571 IVTLCTGFAPIQAAYWSPTNSTVIASVTRSGV-QLWDLKRRSSKPASETTLGSLTTALTVVRFTN 634

  Fly   461 NGKFVSCGSQLGATFLVEVSD 481
            .|:.:..|...|...:..:.|
Mosquito   635 CGRCLLVGDAEGKAHVCALED 655

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Dnai2NP_001261723.1 WD40 212..469 CDD:475233 69/296 (23%)
WD40 repeat 215..254 CDD:293791 11/39 (28%)
WD40 repeat 262..304 CDD:293791 14/59 (24%)
WD40 repeat 318..355 CDD:293791 7/40 (18%)
WD40 repeat 365..401 CDD:293791 13/36 (36%)
WD40 repeat 408..433 CDD:293791 5/24 (21%)
WD40 repeat 162..208 CDD:293791 12/46 (26%)
LOC4576277XP_001237748.2 WD40 <294..650 CDD:441893 87/374 (23%)
WD40 repeat 368..406 CDD:293791 10/37 (27%)
WD40 repeat 416..489 CDD:293791 17/82 (21%)
WD40 repeat 497..533 CDD:293791 7/37 (19%)
WD40 repeat 538..574 CDD:293791 13/36 (36%)
WD40 repeat 581..621 CDD:293791 10/40 (25%)
WD40 repeat 627..664 CDD:293791 7/29 (24%)

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