DRSC/TRiP Functional Genomics Resources

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Protein Alignment Dnai2 and CG13074

DIOPT Version :9

Sequence 1:NP_001261723.1 Gene:Dnai2 / 39318 FlyBaseID:FBgn0036195 Length:585 Species:Drosophila melanogaster
Sequence 2:NP_648835.1 Gene:CG13074 / 39760 FlyBaseID:FBgn0036567 Length:451 Species:Drosophila melanogaster


Alignment Length:482 Identity:88/482 - (18%)
Similarity:143/482 - (29%) Gaps:163/482 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly    88 EQTVRYKRKIEKDENYITQVMNLTKPMEHYIHQNNAVNIYENYFENLDPAPLPEPCKSRTVNVYR 152
            ||.|...:.:|.||..:.:.:....||...              |.::|.||.|           
  Fly    57 EQRVVSSKDVEYDERALAKWLRQICPMVER--------------ELMNPTPLME----------- 96

  Fly   153 DPNPIKVPVKHLSWSPDGGIKMAVSHCDMR-----------FQGDKSNQKCNSYIWE-VENPNEP 205
                                .:.:|.|.:.           ..|...|.: ...||. |...|.|
  Fly    97 --------------------DLTMSQCRLEEKLQVYTYQKLIMGGAENSQ-GLAIWLCVHTNNAP 140

  Fly   206 FLTLEPKVP--CVCLEYNQKDPTSLVSGMYNGQVAAWDTRHGKLPVMISEREVCHRDPVNSVLWN 268
            .|......|  ..|...:|:....:...|..|.:..: |....||:....|.:| .:|.|..::.
  Fly   141 VLVATTVAPHDDWCEHVDQQLKLFVPQRMSVGNLVIY-TEAKTLPLKSCLRSLC-TNPFNKTMFA 203

  Fly   269 NSKSGTEFF------SGGSDGQVLWWDTRKLTE-------------PLDRLLMDPVKSD---DQD 311
            .|....|.|      :.|||..|   |.::|..             |.:.||:....:.   ..|
  Fly   204 GSTMDGELFIWLYEQARGSDSSV---DIKQLYSVSSTQGAAVALDWPREHLLLACFANGSVRQWD 265

  Fly   312 LSRSYGISVLEYETTIPTR---------------FMAGTEMGMLFSCNRKGKTPTEKIQIRMMC- 360
            |||.   ..|::|.|:|..               |:.||..|.::.|...|:......||:::. 
  Fly   266 LSRQ---MALDWEYTLPATVSSEPTAMVTLGLDDFVVGTNDGGVYRCWNTGRQTAAIKQIKLLAL 327

  Fly   361 --HLGPVYAITRNPAFVKNFLTVGDWCARIWSEDCRESSIIWTKSSSSMLTDGAWSYTKVSQFFI 423
              |...|..:.|.......|:...|...:.:..|.|             |.|.            
  Fly   328 RRHRFMVSTLLRTEMEGNLFVLSCDLSGQAFYHDMR-------------LVDE------------ 367

  Fly   424 TRMDGVLDTWDLLQQQNEPVLTVKVCDEPLYCVRTNENGKFVSCGSQLGATFLVEVSD------- 481
                   |...|:.|...|...|..|         :.:|..:.|.:..|:.....|||       
  Fly   368 -------DMAQLIVQIPLPFKNVIAC---------SRDGNIIFCPANDGSLEYYRVSDGAHAHVK 416

  Fly   482 -------NMVMSAKNDKPLLTAMFERE 501
                   :::.|:.|.:.|:..::..|
  Fly   417 GGLRGKGSLIRSSDNGRWLIAGLYGDE 443

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Dnai2NP_001261723.1 WD40 <160..482 CDD:225201 71/389 (18%)
WD40 repeat 162..208 CDD:293791 9/57 (16%)
WD40 212..469 CDD:295369 57/298 (19%)
WD40 repeat 215..254 CDD:293791 7/38 (18%)
WD40 repeat 262..304 CDD:293791 13/60 (22%)
WD40 repeat 318..355 CDD:293791 10/51 (20%)
WD40 repeat 365..401 CDD:293791 6/35 (17%)
WD40 repeat 408..433 CDD:293791 3/24 (13%)
CG13074NP_648835.1 WD40 repeat 189..234 CDD:293791 13/48 (27%)
WD40 repeat 242..275 CDD:293791 8/35 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR12442
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
11.100

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