DRSC/TRiP Functional Genomics Resources

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Protein Alignment Dnai2 and CG13930

DIOPT Version :10

Sequence 1:NP_001261723.1 Gene:Dnai2 / 39318 FlyBaseID:FBgn0036195 Length:585 Species:Drosophila melanogaster
Sequence 2:NP_647645.1 Gene:CG13930 / 38210 FlyBaseID:FBgn0035256 Length:685 Species:Drosophila melanogaster


Alignment Length:602 Identity:134/602 - (22%)
Similarity:226/602 - (37%) Gaps:145/602 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 ERRSFGARVHFEDKDEVVFTENSNPELVK-SYILKNPVDRVTQYAGQTSL---SVANTERATYKS 68
            ||||..|....|:..:|:.......||:. :...:..||..||  ..|:|   .:.||||.|   
  Fly   118 ERRSMTALADTEEGRQVMEDNRKYDELLSGTDKTRRTVDADTQ--TMTALMKSRLVNTERLT--- 177

  Fly    69 TGITHNEGGWPKDINMHDP----EQT-----VRYKRKIEKDENYITQV-----------MNLTKP 113
               |...|.:..:..|:|.    |::     |:..:|:|....::..|           ..|...
  Fly   178 ---TAQMGSYVSNFEMYDTYTDLEKSTTSVQVQGAKKMEITTYHVGGVDQFVGINCLPGFRLALM 239

  Fly   114 MEHYIHQNNAVNIYENYFENL-DPAPLPEPCKSRTVNVYR------------DPNPIKVPVKHLS 165
            :...|..:|.....:..:.|: .|.||.|..|.:    ||            ||. :...|..:|
  Fly   240 LTMRILASNVFEPQQRRYRNMAPPDPLAEDVKFK----YRLGLLWRLSPPSSDPK-VHQAVSDMS 299

  Fly   166 WSPDGGIKMAVSHCDMRFQGDKSNQKCNS-------YIWEVENPNEPFLTLEPKVPCVCLEYNQK 223
            :.|..|..|||::      |..|:.|.:.       |:|.::||..|......:||.|.:|::..
  Fly   300 FCPSNGDIMAVAY------GVYSHGKVSKLPRSGWVYVWNIKNPVNPERRYHYQVPVVTVEFSPT 358

  Fly   224 DPTSLVSGMYNGQVAAWDTRHGKL-PVMISER-EVCHRDPVNSVLWNNSKSG--------TEFFS 278
            .|..|..|::||.|...|.....| |:.:|:| ...:.:||.::.|...:..        |.|.:
  Fly   359 QPQLLAIGLHNGGVEVRDISGQDLPPLAVSQRLSSPYFEPVTAIKWIYFEGDVGCRNPHITPFLA 423

  Fly   279 GGSDGQV-----------LWWDTRKLTE--------PLDR-----------------LLMDPVKS 307
            ....|.|           |..:.::|..        |::|                 :::|||:|
  Fly   424 TSQAGAVTKYRLINSPNMLGLEQQRLQRAEGELEGIPIERQPPAASLLANRHPQCLEIVLDPVQS 488

  Fly   308 DDQDLSRSYGISVLEYETTIPTRFMAGTEMGMLFSCNRKGKTPTEKIQIRMMCHLGPVYAITRNP 372
            |                     .:...|:.|.|:.|:.  ..|.:.:::|.: |.||...:..:|
  Fly   489 D---------------------IYYVLTDEGTLYKCST--NYPLQHLELRQV-HDGPAACMEFSP 529

  Fly   373 AFVKNFLTVG-DWCARIWSEDCRESSIIWTKSSSSMLTDGAWSYTKVSQFFITRMDGVLDTWDLL 436
            ...:.:||.| |||.|||..... ..|:..:...|.:....||.|. |...::.....:|.|||.
  Fly   530 WSPRMYLTCGSDWCIRIWLAGIL-LPIVTLQHHLSPVHCARWSRTH-STILVSLSRSTVDIWDLR 592

  Fly   437 QQQNEPVLTVKVCDEPLYCVRTNENGKFVSCGSQLGATFLVEVSDNMVMSAKNDKPLLTAMFERE 501
            ....:||.:..:..:..|     ...||..||..|.   :...:.|::|.:..|.| ....|:.:
  Fly   593 NSTMKPVSSTVIDADIFY-----TTFKFTHCGRSLA---VGNEAGNLLMLSFEDMP-FPPHFQYK 648

  Fly   502 NRREKILEAKSRESKLK 518
            ..:..|.:|.|.:..|:
  Fly   649 QLKRAIFKALSMQPDLR 665

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Dnai2NP_001261723.1 WD40 212..469 CDD:475233 66/303 (22%)
WD40 repeat 215..254 CDD:293791 12/39 (31%)
WD40 repeat 262..304 CDD:293791 10/85 (12%)
WD40 repeat 318..355 CDD:293791 5/36 (14%)
WD40 repeat 365..401 CDD:293791 11/36 (31%)
WD40 repeat 408..433 CDD:293791 5/24 (21%)
WD40 repeat 162..208 CDD:293791 14/52 (27%)
CG13930NP_647645.1 WD40 repeat 295..344 CDD:293791 15/54 (28%)
WD40 repeat 350..397 CDD:293791 13/46 (28%)
WD40 repeat 400..473 CDD:293791 9/72 (13%)
WD40 442..>629 CDD:441893 46/220 (21%)
WD40 repeat 478..513 CDD:293791 10/57 (18%)
WD40 <518..>593 CDD:475233 23/76 (30%)
WD40 repeat 524..560 CDD:293791 11/36 (31%)

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