DRSC/TRiP Functional Genomics Resources

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Protein Alignment Dnai2 and Dic61B

DIOPT Version :9

Sequence 1:NP_001261723.1 Gene:Dnai2 / 39318 FlyBaseID:FBgn0036195 Length:585 Species:Drosophila melanogaster
Sequence 2:NP_728477.1 Gene:Dic61B / 38020 FlyBaseID:FBgn0263988 Length:764 Species:Drosophila melanogaster


Alignment Length:565 Identity:113/565 - (20%)
Similarity:205/565 - (36%) Gaps:133/565 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly    24 VVFTENSNPELVKSYILKNPVDRVT-QYAGQTSLSVANTERATYKSTGITHNEGGWPKDINMHDP 87
            ::.|:.:....|.::.:.:.::.:| ::|..|..||.:...|..::           :|.:..:.
  Fly   244 ILITKATVSSYVSNFEMYDTLNNITKEFATATMSSVKDLTSALAQT-----------EDADTFED 297

  Fly    88 EQTVRYKRKIEKDENYITQVMNLTKPMEH-----YIHQNNAVNIYE---NYFENLDPAP------ 138
            ::.|..|.|:.      :|:..|.:..|.     |:.:..:.|..|   ..|.|.|...      
  Fly   298 DEAVAEKDKVS------SQIERLFRSPEFRNAIMYMGRTLSSNTNEAGLRRFRNFDQVERWNAEA 356

  Fly   139 ------------LPEPCKSRTVNVYRDPNPIKVPVKHLSWSPDGGIKMAVSHCDMRFQGDKSNQK 191
                        :|||.|..           :..|..:.:....|..:||::....|........
  Fly   357 EYVYSMNLLFRLVPEPSKDE-----------RKAVSDIDFCRSNGDILAVAYGLYSFSSQHVPTS 410

  Fly   192 CNSYIWEVENPNEPFLTLEPKVPCVCLEYNQKDPTSLVSGMYNGQVAAWDTRH-GKLPVMISERE 255
            .:.::|.::||.||.......||...:.::...|:.|..|:|:|.|...|... ...||.:|:|.
  Fly   411 GSVFLWSIKNPGEPERAYYYDVPVTAINFSPFLPSLLAIGLYDGSVEVRDVSSLQDTPVAVSQRS 475

  Fly   256 VC-HRDPVNSVLWNNSKSGTE-------FFSGGSDGQVLWWDTRKLTEP----LDRLLMDPVKSD 308
            .. ...||.::.|....|..:       |.|...||.|..:  |.:..|    ..:::::.|:..
  Fly   476 TSPGSSPVVAIRWIKQVSDDDHETDIDPFLSLSQDGSVTRF--RIIKSPFLLGFTQMILERVEGH 538

  Fly   309 DQDL-----SR--------SYGISVLEYETTIPTR---FMAGTEMGMLFSCNRKGKTPTEKIQIR 357
            .:.:     ||        ..|:|:    ||.|..   :...|:.|.:..|:...:....::   
  Fly   539 PEGIFVHPSSRIPCESNRHPQGLSI----TTHPLHKDIYYVLTDEGCIHKCSINYQHQYLEV--- 596

  Fly   358 MMCHLGPVYAITRNPAFVKNFLTVG-DWCARIWSEDCRE---------SSIIWTKSSSSMLTDGA 412
            :.||.|.|..:..:|...|.|||.| ||..|||.:....         :.:.|.|          
  Fly   597 LRCHDGGVTVMEFSPWSPKLFLTCGNDWFVRIWVDGITRPLLELLDEMTPVHWAK---------- 651

  Fly   413 WSYTKVSQFFITRMDGVLDTWDLLQQQNEPVLTVKVCDEPLYCVRTNENGKFVSCGSQLGATFLV 477
            ||.|. |...:|......:.||..:....|:...|:........|.:..|:.:..|::.|     
  Fly   652 WSPTH-STIIVTVNRETANVWDFRRNLLRPMSKHKMDSSFNTVARFSHCGRTLVIGNERG----- 710

  Fly   478 EVSDNMVMSAKNDKP---------LLTAMFER-ENRREKILEAKS 512
                |.:.:|.||.|         |..|:|:. .|..|.::|.||
  Fly   711 ----NTLFNALNDMPFSPHFQYDELEKAIFKAIGNDHELLMELKS 751

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Dnai2NP_001261723.1 WD40 <160..482 CDD:225201 75/360 (21%)
WD40 repeat 162..208 CDD:293791 9/45 (20%)
WD40 212..469 CDD:295369 63/295 (21%)
WD40 repeat 215..254 CDD:293791 10/39 (26%)
WD40 repeat 262..304 CDD:293791 10/52 (19%)
WD40 repeat 318..355 CDD:293791 7/39 (18%)
WD40 repeat 365..401 CDD:293791 12/45 (27%)
WD40 repeat 408..433 CDD:293791 5/24 (21%)
Dic61BNP_728477.1 WD40 358..730 CDD:225201 84/411 (20%)
WD40 repeat 381..429 CDD:293791 9/47 (19%)
WD40 433..711 CDD:295369 64/306 (21%)
WD40 repeat 434..473 CDD:293791 9/38 (24%)
WD40 repeat 552..599 CDD:293791 8/53 (15%)
WD40 repeat 604..637 CDD:293791 12/32 (38%)
WD40 repeat 645..682 CDD:293791 10/47 (21%)
WD40 repeat 691..727 CDD:293791 9/44 (20%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45435274
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1587
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR12442
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
43.840

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