DRSC/TRiP Functional Genomics Resources

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Protein Alignment Dnai2 and CG1571

DIOPT Version :10

Sequence 1:NP_001261723.1 Gene:Dnai2 / 39318 FlyBaseID:FBgn0036195 Length:585 Species:Drosophila melanogaster
Sequence 2:NP_572435.1 Gene:CG1571 / 31725 FlyBaseID:FBgn0029993 Length:651 Species:Drosophila melanogaster


Alignment Length:601 Identity:201/601 - (33%)
Similarity:326/601 - (54%) Gaps:49/601 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 EYIFKKERRSFGARVHFEDKDEVVFTENSNPELVKSYILKNPVDRVTQYAGQTSLSVANTERATY 66
            ::|:.:|||.||.:..|:|::|::.:.:.:......||:.||.::.||.:.|.:|:|..||..|.
  Fly     5 QFIYSRERRRFGRQCRFQDRNELMVSVHPSGRQRLKYIMANPSEKSTQLSRQMALTVMETENVTL 69

  Fly    67 KSTGITHNEGGWPKDINMHDPEQTVRYKRKIEKDENYITQVMNLTKPMEHYIHQNNAVNIYENYF 131
            ...|:.|.||||||::|.:|.|||.|:::|:|:::::..||:::.:.......|||.:|||:|:|
  Fly    70 DQHGMYHYEGGWPKEVNFNDEEQTQRHRKKVEREDSWGEQVLSMIRTTMSVAEQNNTLNIYQNFF 134

  Fly   132 ENLDPA---PLPEPCKSRTVNVYRDPNPIKVPVKHL---SWSPDGGIKMAVSHCDMRFQGDKSNQ 190
            .:|.|.   .:....::|..||:.|   :.:|.:.|   .|.|:...:....:.:...:|::...
  Fly   135 ADLPPELGHDIKMRFRARVANVFHD---LWLPARQLRSIEWMPNNSRQFMTQYTNHFAKGERLRP 196

  Fly   191 KCNS--------YIWEVENPNEPFLTLEPKVPCVCLEYNQKDPTSLVSGMYNGQVAAWDTRHGKL 247
            ..:.        |:|:|:||.:|.:|.:.|......:...||..::|.|...|||..|.|..|.|
  Fly   197 VTDEPFGGTNGFYVWDVKNPLKPRITYDSKQQVSLAKICPKDENNMVGGTGLGQVCLWGTFKGGL 261

  Fly   248 PVMISEREVCHRDPVNSVLWNNSKSGTEFFSGGSDGQVLWWDTRKLTEPLDRLLMDPVKSDDQDL 312
            |:.....||.||:..:::.|.:|||.|||:||..||.:.:||||.|..|:..||::|...:.|..
  Fly   262 PIRNCPLEVSHRETTSALCWVHSKSNTEFYSGSLDGSIKYWDTRDLKMPMQELLLEPEPQERQSR 326

  Fly   313 SRSYGISVLEYETTIPTRFMAGTEMGMLFSCNRKGKTPTEKIQIRMMCHLGPVYAITRNPAFVKN 377
            ..|:|::|||:|.|||.||:.|::||.:|..||||.||.|.:.......:|||.:|.|||.||||
  Fly   327 MDSHGVTVLEFEYTIPVRFIIGSDMGHVFVGNRKGMTPMETLLAHYQLFVGPVRSINRNPFFVKN 391

  Fly   378 FLTVGDWCARIWSEDCRES-SIIWTKSSSSMLTDGAWSYTKVSQFFITRMDGVLDTWDLLQQQNE 441
            ||..|||.||||||:.::| |.::.:.::.:|. ||||..:.|.|....::||:|.||||....:
  Fly   392 FLVTGDWRARIWSEEVKDSPSTMYFRKNAQILC-GAWSTGRCSLFVTGDINGVVDFWDLLLHHRK 455

  Fly   442 PVLTV--KVCDEPLYCVRTNENGKFVSCGSQLGATFLVEVSDNMVMSAKNDKPLLTAMFERENRR 504
            |:.:|  ||....|.   ....|..::.|.:.|.|.::.:.::|..:...:|.|:.||||||..|
  Fly   456 PIRSVDFKVAIADLV---FRPEGDLLAIGLKNGDTHIMTLDESMRQATGKEKALMAAMFEREIVR 517

  Fly   505 EKILEAKSRESKLKVKA-------------------NHGQDQGD--TMMVNGKINMAPFEAACEQ 548
            .|:|||:..|.:||.|.                   ....|..|  .||:.|.   ..|..|..:
  Fly   518 CKLLEARYDEVRLKRKTLQMAEEERVRKQQQLAPTLELDPDNPDQFVMMIEGD---EEFRTAITE 579

  Fly   549 AASEYFAAVEQERQRR 564
             ..:...:||::|.:|
  Fly   580 -FQDIILSVERKRSKR 594

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Dnai2NP_001261723.1 WD40 212..469 CDD:475233 104/259 (40%)
WD40 repeat 215..254 CDD:293791 12/38 (32%)
WD40 repeat 262..304 CDD:293791 19/41 (46%)
WD40 repeat 318..355 CDD:293791 20/36 (56%)
WD40 repeat 365..401 CDD:293791 22/36 (61%)
WD40 repeat 408..433 CDD:293791 10/24 (42%)
WD40 repeat 162..208 CDD:293791 10/56 (18%)
CG1571NP_572435.1 WD40 210..462 CDD:475233 106/252 (42%)
WD40 repeat 229..269 CDD:293791 12/39 (31%)
WD40 repeat 277..325 CDD:293791 20/47 (43%)
WD40 repeat 332..369 CDD:293791 20/36 (56%)
WD40 repeat 379..415 CDD:293791 22/35 (63%)
WD40 repeat 422..447 CDD:293791 10/25 (40%)

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