DRSC/TRiP Functional Genomics Resources

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Protein Alignment Dnai2 and Dnai4

DIOPT Version :10

Sequence 1:NP_001261723.1 Gene:Dnai2 / 39318 FlyBaseID:FBgn0036195 Length:585 Species:Drosophila melanogaster
Sequence 2:XP_036020022.1 Gene:Dnai4 / 242584 MGIID:2385328 Length:812 Species:Mus musculus


Alignment Length:444 Identity:100/444 - (22%)
Similarity:178/444 - (40%) Gaps:64/444 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly    28 ENSNPELVKSYILKNPVDRVTQ---YAGQTSL-SVANTERATYKSTGITHNEGGWPKDINMHDPE 88
            |..|.|.    |||:  |::.|   |..:..: :|...:.|.|:...:.       |:....:||
Mouse   338 EEDNSEA----ILKS--DKLHQDLFYMERVLMENVFQPKLAAYRQLPVY-------KEHEPEEPE 389

  Fly    89 QTVRYKR-KIEKDENYITQVMNLTKPMEHYIHQNNAVNIYENYFENLDPAPLPEPCKSRTVNVYR 152
            :|::.:. |:.:||.        .|..|..:.....:.|...  ::..||.| |...|.:.::.:
Mouse   390 ETLQVENLKVAEDEP--------KKEDEEEVEMELELEIATE--QSTIPANL-ERLWSFSCDLTK 443

  Fly   153 DPNPIKVPVKHLSWSPDGGIKMAVSHCDMRFQGDKSNQKCNSYIWEVENPNEPFLTLEPKVPCVC 217
            ..|     |..|||:......:||.:.:..|:..|....|   .|.::||..|....:.......
Mouse   444 GLN-----VSSLSWNKANPDLLAVGYGNFGFREQKKGMAC---CWSIKNPMWPERIYQSSYGVTS 500

  Fly   218 LEYNQKDPTSLVSGMYNGQVAAWDTRHG-KLPVM-ISEREVCHRDPVNSVLWNNSKSGTE----- 275
            ::::...|..|..|.:||.||.::.:.. .:||: .||....|..||..|.|.....||.     
Mouse   501 VDFSNSSPNLLAVGYHNGTVAIYNVQSSHNIPVLDSSESPQKHLGPVWQVQWIEQDRGTTGDDKR 565

  Fly   276 --FFSGGSDGQVLWWDTRKLTEPLDRLLM------------DPVKSDDQDLSRSYGISVLEYETT 326
              ..|..:||::..|..||..:..|.:.:            :..|..:..:||........:...
Mouse   566 EILVSISADGRISKWIIRKGLDCHDLMRLKRTTATGGKKGGEKEKKGEALISRQAPGMCFAFHPK 630

  Fly   327 IPTRFMAGTEMGMLFSCNRKGKTPTEKIQIRMMCHLGPVYAITRNPAFVKNFLTV-GDWCARIWS 390
            ....::||||.|::..|:   .:..|:.......|.||||.:|.||.....||:. .||...||.
Mouse   631 DTNIYLAGTEEGLIHKCS---CSYNEQYLETYRGHKGPVYKVTWNPFCPDVFLSCSADWGVMIWH 692

  Fly   391 EDCRESSIIWTKSSSSMLTDGAWSYTKVSQFFITRMDGVLDTWDLLQQQNEPVL 444
            :|..:..:.: ..::.::.|.:|| .|.:..|....:..::.|||.....:|::
Mouse   693 QDTVKPFLSF-YPTTYVVYDVSWS-PKSAYIFAAANENRVEIWDLQISTLDPLI 744

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Dnai2NP_001261723.1 WD40 212..469 CDD:475233 59/255 (23%)
WD40 repeat 215..254 CDD:293791 10/40 (25%)
WD40 repeat 262..304 CDD:293791 12/60 (20%)
WD40 repeat 318..355 CDD:293791 7/36 (19%)
WD40 repeat 365..401 CDD:293791 12/36 (33%)
WD40 repeat 408..433 CDD:293791 5/24 (21%)
WD40 repeat 162..208 CDD:293791 12/45 (27%)
Dnai4XP_036020022.1 WD40 repeat 448..493 CDD:293791 12/47 (26%)
WD40 <480..782 CDD:441893 63/270 (23%)
WD40 repeat 498..542 CDD:293791 11/43 (26%)
WD40 repeat 548..617 CDD:293791 12/68 (18%)
WD40 repeat 622..660 CDD:293791 7/40 (18%)
WD40 repeat 667..702 CDD:293791 11/34 (32%)
WD40 repeat 709..741 CDD:293791 8/32 (25%)
WD40 repeat 751..780 CDD:293791
Blue background indicates that the domain is not in the aligned region.

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