DRSC/TRiP Functional Genomics Resources

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Protein Alignment Dnai2 and Dync2i1

DIOPT Version :10

Sequence 1:NP_001261723.1 Gene:Dnai2 / 39318 FlyBaseID:FBgn0036195 Length:585 Species:Drosophila melanogaster
Sequence 2:XP_006515843.1 Gene:Dync2i1 / 217935 MGIID:2445085 Length:1033 Species:Mus musculus


Alignment Length:546 Identity:98/546 - (17%)
Similarity:171/546 - (31%) Gaps:159/546 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly    43 PVDRVTQYAGQTSLSVANTERATYKSTGITHNEGGWPKDI-----------NMHDPEQTVRYKRK 96
            ||:....|       :.|..:...|...:.:||....:||           ..|..|.|......
Mouse   489 PVNEYDMY-------IRNFGKKNTKQAYVQYNEDNVERDIQTEDIETREVWTQHPGEGTAVSGGS 546

  Fly    97 IEKDENYITQVMNLTKP-MEHYIH-------------------------QNNAVNIYENYFENLD 135
            .|||.:.:|.|..:..| :.:::.                         |:.|:||.::..:...
Mouse   547 EEKDFSDVTVVPKIDTPRLANFLRAACQVVAVLLEEDRLAAGPSWIPRAQDKALNISDSSSQLNT 611

  Fly   136 PAPLPEPCKSRTVNVYRDPNPIKVPVKHLSWSPDGGIKMAVSHCDMRFQGDKSNQKCNSYIWEVE 200
            ..|..:..|...::..|......|.|..|   |:.....::         |..:..|   :|::.
Mouse   612 SLPFLQSRKVSCLHASRVQRQTVVSVHDL---PEKAFAPSL---------DSRHLLC---VWDIW 661

  Fly   201 NPNEP--FLTLEPKVPCVCLEYNQKDPTSLVSGMYNGQVAAWDTRHG----------------KL 247
            .|:.|  .|..|.||.|.|  ::......|.:|..:|.|..||.|..                :.
Mouse   662 QPSGPQKVLICESKVTCCC--FSPLKAFLLFAGTVHGSVVVWDLREDSRIHHYVRLSNCFWAFRT 724

  Fly   248 PVMISE---REVCHRDPVNSV------------------LWNNSKSGTEFFSGGSD--GQVLWWD 289
            |...::   ..|.||.|:.::                  ......:|..|.....|  |.:..|.
Mouse   725 PTFSTDGILTSVNHRSPLQAIEPVATSAYKKQSFVLSPFSTQEEMAGLSFHIASLDETGVLNVWV 789

  Fly   290 TRKLTE-------------PLDRL---------LMDPVKSDDQDLSRSYGISVLEYETTIPTRFM 332
            ..:|.:             |..|:         |.:.:...|.:|..|.....:::..:.|..|:
Mouse   790 VVELPKADISGSMSDLGLIPGGRIKLVHSTVIQLGNSLSHKDSELWGSTQTLSVKFLPSDPNHFV 854

  Fly   333 AGTEMGML--------------FSCNRKGKTPTEKIQIRMMCHLGPVYAITRNPAFVKNFLTVG- 382
            .||:||::              |...:.|..|.:            |..|..:| |.:.....| 
Mouse   855 VGTDMGLISHSTRQDWRVSPRVFKPEQHGVRPIK------------VNVIDFSP-FEETVFLAGC 906

  Fly   383 -DWCARIWSEDCRESSIIWTKSSSS-MLTDGAWSYTKVSQFFITRMDGVLDTWDLLQQQNEPVLT 445
             |...|:.........:.|..|:|. .:|...||.|:.:.|.:......:..||||:....||..
Mouse   907 SDGSIRLHQLTSERPIMQWDNSTSGHAVTSLQWSPTRPAVFLVQDDASRIYVWDLLENDLGPVAQ 971

  Fly   446 VKVCDEPLYCVR-----TNENGKFVS 466
            ..:..:.|..:.     ...:|.||:
Mouse   972 QPISPDKLVAMTIVGEPEKTSGSFVA 997

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Dnai2NP_001261723.1 WD40 212..469 CDD:475233 62/338 (18%)
WD40 repeat 215..254 CDD:293791 10/57 (18%)
WD40 repeat 262..304 CDD:293791 9/83 (11%)
WD40 repeat 318..355 CDD:293791 9/50 (18%)
WD40 repeat 365..401 CDD:293791 7/37 (19%)
WD40 repeat 408..433 CDD:293791 5/24 (21%)
WD40 repeat 162..208 CDD:293791 7/47 (15%)
Dync2i1XP_006515843.1 PTZ00121 <48..396 CDD:173412
WD40 repeat 635..671 CDD:293791 9/50 (18%)
WD40 673..961 CDD:475233 54/302 (18%)
WD40 repeat 676..708 CDD:293791 10/33 (30%)
WD40 repeat 715..752 CDD:293791 5/36 (14%)
WD40 repeat 759..788 CDD:293791 4/28 (14%)
WD40 repeat 842..878 CDD:293791 6/35 (17%)
WD40 repeat 890..926 CDD:293791 6/36 (17%)
Blue background indicates that the domain is not in the aligned region.

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