DRSC/TRiP Functional Genomics Resources

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Protein Alignment Dnai2 and wdr-60

DIOPT Version :9

Sequence 1:NP_001261723.1 Gene:Dnai2 / 39318 FlyBaseID:FBgn0036195 Length:585 Species:Drosophila melanogaster
Sequence 2:NP_001367569.1 Gene:wdr-60 / 175676 WormBaseID:WBGene00016165 Length:668 Species:Caenorhabditis elegans


Alignment Length:613 Identity:126/613 - (20%)
Similarity:201/613 - (32%) Gaps:196/613 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 KERRSFG------ARVHFEDKDEVVFTE---------NSNPELVKSYILKNPVDRVTQYAGQTSL 56
            :|:|:||      ..:..|.....|||:         ||.|        .|....:||.......
 Worm   150 QEQRAFGRLNKLRGLISIEVTKSQVFTDLSSNIFEPFNSLP--------SNKSHALTQTGKDCHT 206

  Fly    57 SVANTER--ATYKSTGITHNEG-----GWPKDINMHD----------PEQTVR-----YKRKIEK 99
            ....|||  ...|.|...|:|.     |..|:....|          ..||:|     ..:..|:
 Worm   207 EEVQTERGETEEKETQCPHSESTRIEDGIEKERTSTDRARLKKFFFAATQTIREILISEDKSAEE 271

  Fly   100 DEN---------------YITQVMNLTKPMEHYIHQNNAVNIYENYFENLDPAPLPEPC-KSRTV 148
            ||.               .:.||:..:|.......::::|.:....||    :|.|:.. ||..|
 Worm   272 DETREKSISKFSRGYNPFRLCQVVTKSKSTCIRKGESDSVLVAYEIFE----SPAPDLINKSLIV 332

  Fly   149 NVY----RDPNPIKVPVKHLSWSPDGGIKMAVSHCDMRFQGDKSNQKCNSYIWEVENPNEPFLTL 209
            ..:    |.|..:.|            ::..||..::    .:|:|                   
 Worm   333 EFFVHKRRPPKRLFV------------VESIVSVMEL----SQSSQ------------------- 362

  Fly   210 EPKVPCVCLEYNQKDPTSLVSGMYNGQVAAWDTR------HGKLPVMISEREVCHR--------- 259
               :..|||              .:|...|:|..      ...||.:.||..:..|         
 Worm   363 ---ILYVCL--------------MDGTFCAFDLSITDAFFDDNLPWVDSETNIALRRPTFDSSFL 410

  Fly   260 -------DPVNSVLWNNSKSGTEFFSGGSDGQVLWWDTRKLTEPLDRLLMDPVKSDDQDLSR--- 314
                   .|:..:....|..|.|..:..:.|.:.:|...::.:...|||:..|......|.|   
 Worm   411 ATTVSDATPLIGIALGKSSVGEEITTIDTAGTISYWIANRVEKNELRLLLTAVIRPHPVLKRHST 475

  Fly   315 SYGISVLEYETTIPTRFMAGTEMGMLFSCNRKG---------KTPTEKIQIRMMCHLGPVYAITR 370
            |:.:|...:.|. |.||..||:.|||:|..:..         ||..||        .|.|..|..
 Worm   476 SFAVSAFCHVTN-PLRFFIGTDTGMLYSMYKSDTSQAIPKIYKTEKEK--------YGEVTVIAA 531

  Fly   371 NPA--------FVKNFLTVGDWCARIWSEDCRESSI--IWTKSSSSMLTDGAWSYTKVSQFFITR 425
            ||:        |....::|        ....:.|||  |.|...|:.:|..:||.|..|.|:...
 Worm   532 NPSDNTVLIVGFSNGSISV--------YRTTQASSIVNIPTADLSTRVTWISWSLTNPSGFYTIH 588

  Fly   426 MDGVLDTWDLLQQQNEPVLTVKVCDEPLYCVRTNENGKFVSCGSQLG-ATFLVEVSDNMVMSAKN 489
            ...::..|||..:     |:.|..|.....|:...:..::|..:::| ..|.:...|:.|...::
 Worm   589 NSNIITYWDLGFK-----LSPKSVDHRTDSVQVLASDTWLSENAKIGYMAFGLSNGDSEVHVLED 648

  Fly   490 DKPLLTAMFERENRREKILEAKSRESKL 517
            .        .|:|:.|.|||...|...|
 Worm   649 P--------ARKNQNETILEVLRRIKNL 668

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Dnai2NP_001261723.1 WD40 <160..482 CDD:225201 72/366 (20%)
WD40 repeat 162..208 CDD:293791 4/45 (9%)
WD40 212..469 CDD:295369 66/300 (22%)
WD40 repeat 215..254 CDD:293791 9/44 (20%)
WD40 repeat 262..304 CDD:293791 8/41 (20%)
WD40 repeat 318..355 CDD:293791 15/45 (33%)
WD40 repeat 365..401 CDD:293791 10/45 (22%)
WD40 repeat 408..433 CDD:293791 6/24 (25%)
wdr-60NP_001367569.1 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1587
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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