DRSC/TRiP Functional Genomics Resources

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Protein Alignment Dnai2 and Dync1i1

DIOPT Version :9

Sequence 1:NP_001261723.1 Gene:Dnai2 / 39318 FlyBaseID:FBgn0036195 Length:585 Species:Drosophila melanogaster
Sequence 2:XP_006505045.1 Gene:Dync1i1 / 13426 MGIID:107743 Length:645 Species:Mus musculus


Alignment Length:534 Identity:115/534 - (21%)
Similarity:202/534 - (37%) Gaps:105/534 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly    20 DKDEVVFTENSNPELVKSYILKNPVDRVTQ----------YAGQTSLSVANTERATYKSTGITHN 74
            |.|..|....|:.||.:. :.|..|.:|||          |:.:|...:|            ||.
Mouse   127 DTDPSVLQLQSDSELGRR-LHKLGVSKVTQVDFLPREVVSYSKETQTPLA------------THQ 178

  Fly    75 EGGWPKDINMHDPEQTVRYKRKIE----KDENYITQVMNLT-KPMEHYIHQNNAVNIYENYFENL 134
            .....:|..|.:|:  :.:..::|    |.|........|| :..:..:|....:..::.....:
Mouse   179 SEEDEEDEEMVEPK--IGHDSELENQEKKQETKEAPPRELTEEEKQQILHSEEFLIFFDRTIRVI 241

  Fly   135 DPAPLPEPCKSRTVNVYRDPNPIKVPVK--------HLS---------WSPDGGIKMAVSHCDMR 182
            :.| |.|..     :::.|.:..::..|        :||         ||     |..|..| |.
Mouse   242 ERA-LAEDS-----DIFFDYSGRELEEKDGDVQAGANLSFNRQFYDEHWS-----KHRVVTC-MD 294

  Fly   183 FQGDKSNQKCNSYIWEVENPNEP----------FLTLEPK--------VPCVCLEYNQKDPTSLV 229
            :..........||....:.|:||          |....|:        |..||  :.:..|..:|
Mouse   295 WSLQYPELMVASYSNNEDAPHEPDGVALVWNMKFKKTTPEYVFHCQSSVMSVC--FARFHPNLVV 357

  Fly   230 SGMYNGQVAAWDTR-HGKLPVMISE-REVCHRDPVNSVLWNNSKSGTEFFSGGSDGQVLWWDTRK 292
            .|.|:||:..||.| |.:.||..:. ....|..||..|....:::.....:..:||::..|....
Mouse   358 GGTYSGQIVLWDNRSHRRTPVQRTPLSAAAHTHPVYCVNVVGTQNAHNLITVSTDGKMCSWSLDM 422

  Fly   293 LTEPLDRLLMDPVKSDDQDLSRSYGISVLEYETTIPTRFMAGTEMGMLFSCNRKGKTPTEKIQIR 357
            |:.|.:.:.:...|      |:...::.:.:.|.....|:.|:|.|.:::..|.|    .|..|.
Mouse   423 LSTPQESMELVYNK------SKPVAVTGMAFPTGDVNNFVVGSEEGTVYTACRHG----SKAGIG 477

  Fly   358 MMC--HLGPVYAITRNPA-----FVKNFLTVG-DWCARIWSEDCRESSIIWT-KSSSSMLTDGAW 413
            .:.  |.|||..|..:.|     |...|:|.. ||..::|:  .:.:..::: :.::..:.|..|
Mouse   478 EVFEGHQGPVTGINCHMAVGPIDFSHLFVTSSFDWTVKLWT--TKHNKPLYSFEDNADYVYDVMW 540

  Fly   414 SYTKVSQFFITRMDGVLDTWDLLQQQNEPVLTVKV-CDEPLYCVRTNENGKFVSCGSQLGATFLV 477
            |....:.|......|.||.|:|......|..:|.: ....|..||..:.||.|:.|...|..::.
Mouse   541 SPVHPALFACVDGMGRLDLWNLNSDTEVPTASVAIEGASALNRVRWAQGGKEVAVGDSEGRIWIY 605

  Fly   478 EVSDNMVMSAKNDK 491
            :|.:..|  ..||:
Mouse   606 DVGELAV--PHNDE 617

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Dnai2NP_001261723.1 WD40 <160..482 CDD:225201 83/368 (23%)
WD40 repeat 162..208 CDD:293791 15/72 (21%)
WD40 212..469 CDD:295369 64/276 (23%)
WD40 repeat 215..254 CDD:293791 14/40 (35%)
WD40 repeat 262..304 CDD:293791 7/41 (17%)
WD40 repeat 318..355 CDD:293791 8/36 (22%)
WD40 repeat 365..401 CDD:293791 9/41 (22%)
WD40 repeat 408..433 CDD:293791 7/24 (29%)
Dync1i1XP_006505045.1 Dynein_IC2 147..173 CDD:371592 7/25 (28%)
WD40 283..606 CDD:392136 79/342 (23%)
WD40 repeat 291..337 CDD:293791 9/46 (20%)
WD40 repeat 346..385 CDD:293791 14/40 (35%)
WD40 repeat 393..434 CDD:293791 6/40 (15%)
WD40 repeat 442..481 CDD:293791 9/42 (21%)
WD40 repeat 488..529 CDD:293791 8/42 (19%)
WD40 repeat 535..573 CDD:293791 10/37 (27%)
WD40 repeat 581..607 CDD:293791 8/25 (32%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1587
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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