DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG14135 and thap1

DIOPT Version :9

Sequence 1:NP_001261721.1 Gene:CG14135 / 39316 FlyBaseID:FBgn0036193 Length:259 Species:Drosophila melanogaster
Sequence 2:NP_001006738.1 Gene:thap1 / 448407 XenbaseID:XB-GENE-1008758 Length:225 Species:Xenopus tropicalis


Alignment Length:261 Identity:54/261 - (20%)
Similarity:100/261 - (38%) Gaps:86/261 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 CAVKNCGNNNRIANRTKWRYFH-FPKEKPNL-QRWIDFCQRDNINPTT-ACICNEHFAPNDFERN 64
            |:...|.|.   .::.|...|| ||.::|.| ::|....:|.:..||. :.||::||..:.|:|.
 Frog     5 CSAYGCKNR---YDKDKPISFHKFPLKRPLLCRKWEAAVRRADFKPTKYSSICSDHFTADCFKRE 66

  Fly    65 MQYELGFSRKNPTKLKPGSFPSVNGPQKLAKELRGSIKRGSKSVPLAGSTKMSNIGFDPHHAGTQ 129
            ...:|         ||..:.|::....::.|:...::|:  :.:|                    
 Frog    67 CNNKL---------LKDNAVPTIFAHTEIKKKSGKAVKK--EQLP-------------------- 100

  Fly   130 SSEGHETIEIQLCGFNTDIEGFEEAEDDDCPSGPRLVEVE-----ILDPLNPQSNAKDHVEIIDS 189
                                    ||.:..||.|   ||:     :|.||...|    |:.:|..
 Frog   101 ------------------------AEPEPVPSVP---EVDPAIGLLLPPLYTPS----HIAVICD 134

  Fly   190 EGDSY---------VKHLELEICSLKREVFFLKDEYQKIKAEMRNLKDTIKRSEEELAEKQLQGV 245
            ...:.         ::.||.::..|:::   ||...||.:.:.|:| :.::|...|..|.:..|.
 Frog   135 HNYTVEDTVHQRRRIQQLEEQVDKLRKK---LKIANQKCRRQERSL-EKLEREVSEYREAKGSGY 195

  Fly   246 V 246
            |
 Frog   196 V 196

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG14135NP_001261721.1 THAP 2..88 CDD:283206 24/87 (28%)
GrpE 198..>239 CDD:295646 11/40 (28%)
thap1NP_001006738.1 THAP 5..81 CDD:368467 24/87 (28%)
Tropomyosin_1 <147..184 CDD:372267 10/40 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR46600
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
22.010

Return to query results.
Submit another query.