DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG14135 and Thap12

DIOPT Version :9

Sequence 1:NP_001261721.1 Gene:CG14135 / 39316 FlyBaseID:FBgn0036193 Length:259 Species:Drosophila melanogaster
Sequence 2:NP_001178559.1 Gene:Thap12 / 308845 RGDID:1309679 Length:757 Species:Rattus norvegicus


Alignment Length:259 Identity:54/259 - (20%)
Similarity:96/259 - (37%) Gaps:69/259 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 CAVKNCGNNNRIANRTKWRYFHFPKEKPNLQRWIDFCQRDNINPTTACICNEHF--APNDFERNM 65
            ||..||   .|.:.::...:|.||::....|:|::.|:|.::...|....|:|:  ....||.:|
  Rat     5 CAAPNC---TRKSTQSDLAFFRFPRDPARCQKWVENCRRADLEDKTPDQLNKHYRLCAKHFETSM 66

  Fly    66 QYELGFSRKNP--TKLKPGSFPSV-------NGP----QKLAKELRGSIKRGSKSVPLAGSTKMS 117
                 ..|.:|  |.|:..:.|::       |.|    :|..|||.....|..|...:..:::..
  Rat    67 -----ICRTSPYRTVLRDNAIPTIFDLTSHLNNPHSRHRKRIKELSEDEIRTLKQKKIEETSEQE 126

  Fly   118 NIGFDPHHAGTQSSEGHETIEIQLCGFNTDIEG------FEEAEDDDCPSGPRLVEVEILDPLNP 176
            .        .|.|:..:.:.|:     ....:|      .||.|:.:....  |.|:.||     
  Rat   127 Q--------ETNSNAQNPSAEV-----GNQQDGNVLPLTLEEKENKEYLKS--LFEILIL----- 171

  Fly   177 QSNAKDHVEIIDSEGDSYVKHLELEICSLKREVFFLKDEYQKIKAEMRNLKDTIKRSEEELAEK 240
              ..|.::.:...|.|...:.|            |..|.:|.:      |:..|...||.|.::
  Rat   172 --MGKQNIPLDGHEADEIPEGL------------FAPDNFQAL------LECRINSGEEVLRKR 215

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG14135NP_001261721.1 THAP 2..88 CDD:283206 23/95 (24%)
GrpE 198..>239 CDD:295646 9/40 (23%)
Thap12NP_001178559.1 THAP 6..86 CDD:398893 22/87 (25%)
DUF4371 <153..326 CDD:405048 19/90 (21%)
Dimer_Tnp_hAT <668..725 CDD:399013
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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