DRSC/TRiP Functional Genomics Resources

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Protein Alignment Sugb and YHR140W

DIOPT Version :9

Sequence 1:NP_648493.3 Gene:Sugb / 39314 FlyBaseID:FBgn0036191 Length:604 Species:Drosophila melanogaster
Sequence 2:NP_012009.1 Gene:YHR140W / 856543 SGDID:S000001182 Length:239 Species:Saccharomyces cerevisiae


Alignment Length:209 Identity:45/209 - (21%)
Similarity:68/209 - (32%) Gaps:72/209 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly   208 NVTLYCPKEKEYFKSNCTMDC----REDYLKEQ--LAESAVINTSSAVTMPQFW---LFFGLLIF 263
            |::.|      |.:.|..|:.    :.|::...  |..|.|:.:..|..   :|   |||..||.
Yeast    62 NISNY------YIQRNNKMNLETKKKSDFISRHVTLPVSLVLESIVATV---YWPLRLFFVNLIM 117

  Fly   264 SWIGMAVVVSIGDAICFGILGDRHHLYGKQRLCGSLGWGVFALLAGLLVDHMSLGEVNK----NY 324
            ..:...........:...|     |||.               :..||.||...|...|    |.
Yeast   118 HGVESTAKTPFPMTVDMAI-----HLYP---------------ILYLLADHYLSGSGTKFKLSNK 162

  Fly   325 TAVFWMALLIMGFDVFASSKLRHTPTHLSSNILKDVGQ------MFLSV----RCVIFFLWCVAI 379
            .|  |:.:..:.|..|         .:|:  .|.|.||      .||.|    :.:||.:  || 
Yeast   163 HA--WLIVTSLAFSYF---------QYLA--FLIDAGQGQAYPYPFLDVNEPYKSIIFVV--VA- 211

  Fly   380 GLGTALIWNFLFIY 393
                .:.|.:...|
Yeast   212 ----TITWAYYVFY 221

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SugbNP_648493.3 MFS 9..82 CDD:304372
MFS_1 16..>96 CDD:284993
MFS_1 <252..518 CDD:284993 35/159 (22%)
MFS <254..547 CDD:119392 35/157 (22%)
YHR140WNP_012009.1 Far-17a_AIG1 <83..220 CDD:368096 39/179 (22%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 1 0.950 - 0.78878 Normalized mean entropy S3904
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.950

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