DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Sugb and SEC72

DIOPT Version :9

Sequence 1:NP_648493.3 Gene:Sugb / 39314 FlyBaseID:FBgn0036191 Length:604 Species:Drosophila melanogaster
Sequence 2:NP_013395.1 Gene:SEC72 / 850999 SGDID:S000004283 Length:193 Species:Saccharomyces cerevisiae


Alignment Length:152 Identity:30/152 - (19%)
Similarity:53/152 - (34%) Gaps:49/152 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly   303 VFALLAGLLVDHMS------LGEVNKNYTAVFWMALLIMGFDVFASSKLRHTPTHLSSNILKDVG 361
            |.||.....:|.::      :||.|.|:|.....||..|...:|.|. :::......:..||:|.
Yeast    19 VVALSTETNIDQINVLTTSLIGETNPNFTPQPNEALSKMIKGLFESG-MKNLQQKKLNEALKNVS 82

  Fly   362 ---------------------QMFLSVRCVIFFLWCVAIG------------LGTALIWNFLFI- 392
                                 ::...:|..|..  |:.:|            |||.||...:|: 
Yeast    83 LAIEMAQRKRAPWEAFAIQLPELHFMLRSKIDL--CLILGKHLEALQDLDFLLGTGLIQPDVFVR 145

  Fly   393 ------YLEELDKAFEGCDSSI 408
                  .|.:.::|...|:..:
Yeast   146 KADCLLKLRQWEEARATCERGL 167

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SugbNP_648493.3 MFS 9..82 CDD:304372
MFS_1 16..>96 CDD:284993
MFS_1 <252..518 CDD:284993 30/152 (20%)
MFS <254..547 CDD:119392 30/152 (20%)
SEC72NP_013395.1 TPR repeat 139..169 CDD:276809 4/29 (14%)
PLN03088 <143..>189 CDD:215568 4/25 (16%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 1 0.950 - 0.78878 Normalized mean entropy S3904
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.950

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