DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Sugb and Spf45

DIOPT Version :9

Sequence 1:NP_648493.3 Gene:Sugb / 39314 FlyBaseID:FBgn0036191 Length:604 Species:Drosophila melanogaster
Sequence 2:NP_001036426.1 Gene:Spf45 / 3355114 FlyBaseID:FBgn0086683 Length:403 Species:Drosophila melanogaster


Alignment Length:39 Identity:10/39 - (25%)
Similarity:14/39 - (35%) Gaps:16/39 - (41%)


- Green bases have known domain annotations that are detailed below.


  Fly    52 PIIGMLAKPLFG----------------YIADRYHRHRP 74
            ||..:::|||..                .:||.|...||
  Fly    62 PITTVVSKPLISGKALPSILERINRGDWDVADEYDPQRP 100

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SugbNP_648493.3 MFS 9..82 CDD:304372 10/39 (26%)
MFS_1 16..>96 CDD:284993 10/39 (26%)
MFS_1 <252..518 CDD:284993
MFS <254..547 CDD:119392
Spf45NP_001036426.1 G-patch 209..248 CDD:279867
RRM_UHM_SPF45 307..402 CDD:241091
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 1 0.950 - 0.78878 Normalized mean entropy S3904
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
10.950

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