DRSC/TRiP Functional Genomics Resources

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Protein Alignment Sugb and mfsd-6

DIOPT Version :9

Sequence 1:NP_648493.3 Gene:Sugb / 39314 FlyBaseID:FBgn0036191 Length:604 Species:Drosophila melanogaster
Sequence 2:NP_498662.1 Gene:mfsd-6 / 176073 WormBaseID:WBGene00020051 Length:630 Species:Caenorhabditis elegans


Alignment Length:588 Identity:127/588 - (21%)
Similarity:217/588 - (36%) Gaps:133/588 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly    16 YFLFNAGTAPVVPFMPTLAGQLGYSPAVVGTMYTILPIIGMLAKPLFGYIADRYHRHRPLF---L 77
            |..|.|....:.|.:.....|||.:.|..|.:....||:..|:.|.:...|.|:.:.:.|.   |
 Worm    28 YLSFFASFGSLFPLLAVYFKQLGMTAAQAGFLIGSRPIVEFLSGPFWSQFASRFRKQKLLLLFSL 92

  Fly    78 GGQVLTGIAFFLIMFVPGMEKPLPKVEFHCHQGVSDIPRFCSEYGECVERNLERYYGNRTLECEL 142
            |.         |::|..|:..            |..:..:|..|..         .||:|.:..|
 Worm    93 GS---------LVLFTLGIGL------------VQPVTPYCIVYVP---------EGNKTCQTML 127

  Fly   143 NCEAQPFMWDI--VCEDWLKNNTENCAANRTNTQMEFGASITMQKIENDGSCMFFMIPHDQGQIA 205
            ....:......  :.::.|...:...|..|..||     |..::||.:..|     ...::..:|
 Worm   128 APAGKIIRGGALGMLKETLVGGSTRPARQRRQTQ-----SPLVEKIIDLSS-----FDSEEDTVA 182

  Fly   206 GQNVTLYCPKEKEYFKSNCTMDCREDYLKEQLAESAVINTSSAVTMPQ-------------FWLF 257
            |     ..|   ||...:...:..||            |....|:.|.             |.|.
 Worm   183 G-----IAP---EYITRDRVCNYNED------------NYGILVSPPHSTRVYRQPAVEQAFMLL 227

  Fly   258 FGLLIFSWIGMAVVVSIGDAICFGILGDRHHLYGKQRLCGSLGWGVFALLAGLLVDHMSL----- 317
            ..|:.......|..:.:.||.....:.|....:||.||..|:|||....:.|:.:|:...     
 Worm   228 LILICLCEFFSAPALPLADAATLHSVRDNPAEFGKIRLMASVGWGFAMFIMGIALDYSDTFRNHP 292

  Fly   318 ----GEVNKNYTAVFWMALLIMGFDVFASSKLRHTP--------------------THL------ 352
                ....||||..|.|.::.|...:..:||.:...                    :|:      
 Worm   293 CPAENTTEKNYTLCFVMCVIFMLAAMGLASKFKFDDDVPAPGEVHGLVMDTREAEVSHVVAEKAR 357

  Fly   353 -----------SSNILKDVGQMFLSVRCVIFFLWCVAIGLGTALIWNFLFIYLEELDKAFEGCDS 406
                       |.|.|....:...|:..::||:..|.:|.|..|:::||:.:|:::        .
 Worm   358 ARITQSEGGGGSENSLLLAMKALASMHILLFFVSVVVMGGGAGLVFSFLYWHLQDI--------G 414

  Fly   407 SIKTLEGLVMGIQCFGGELPFFFLSGWILKKIGHVNAMSVVLFGFGVRFILYSMLQNPWYILPIE 471
            ....|.| ::.:.....|:..:|....::.|.|||..|.:.|.....||:..|:|.|||.:||::
 Worm   415 GSPVLFG-ILSVVNHASEIITYFYVFKLINKYGHVRVMYLCLAVNFFRFMALSILDNPWMVLPLQ 478

  Fly   472 LMNGVTFGLFYATMASYASIVAPPGTDATMQSLVGAIFEGVGVSMGSLIAGQLFESVTARTTFEI 536
            ::.|......::..:||.|:||||......|..:...:.|:|..:||:|.|.:...:..||||.|
 Worm   479 ILQGACLATVWSCASSYISLVAPPHAKQHAQYALQVGYHGIGKGLGSIIGGSVISIIGTRTTFVI 543

  Fly   537 FGI 539
            :|:
 Worm   544 YGL 546

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SugbNP_648493.3 MFS 9..82 CDD:304372 18/68 (26%)
MFS_1 16..>96 CDD:284993 20/82 (24%)
MFS_1 <252..518 CDD:284993 71/324 (22%)
MFS <254..547 CDD:119392 80/332 (24%)
mfsd-6NP_498662.1 MFS_MFSD6 23..560 CDD:340893 127/588 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR16172
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
22.010

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