DRSC/TRiP Functional Genomics Resources

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Protein Alignment TfIIEalpha and AT4G20810

DIOPT Version :10

Sequence 1:NP_524026.1 Gene:TfIIEalpha / 39313 FlyBaseID:FBgn0015828 Length:429 Species:Drosophila melanogaster
Sequence 2:NP_193813.1 Gene:AT4G20810 / 827829 AraportID:AT4G20810 Length:416 Species:Arabidopsis thaliana


Alignment Length:437 Identity:85/437 - (19%)
Similarity:165/437 - (37%) Gaps:111/437 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly    31 LARLVVRGFY------------SLED------ALIIDMLVRNPCMKEDDIGELLRFEKKQLRARI 77
            :.:||.:.||            |.::      .|::|.|.|...::|:|:.:.|:...||||..:
plant     1 MVKLVAKTFYDNYTPKNNNQKKSAKNGSGGIAVLVLDALTRRQWVREEDLAKELKLNTKQLRTIL 65

  Fly    78 TTLRTDKFI-QIRLKMET-------GPDG-KAQKVNYYFINYKTFVNVVKYKLDLMRKRMETEER 133
            ......:|| ::..|.::       |.|. |....:|..::|....:|::|||..|:|..:....
plant    66 RYFEEQQFIMRVHRKEKSSATTNGRGEDKVKVHMYSYCCLDYSQIYDVIRYKLHRMKKEFKDVLE 130

  Fly   134 DATSRASFKCSSCSKTFTDLEADQLFDMATLEFRCTFCGSSV---------EE---DSAAMPK-- 184
            |..:...:.|.:|.:        ::|      |.|..|...:         ||   |.:..|:  
plant   131 DKDNVQEYGCPNCKR--------KIF------FHCENCNGELVMECNKLTSEEVVVDGSDNPRSR 181

  Fly   185 ----KDSRLMLAHFNEQLQPLYDLLREVEGIKLAPEVLEPEPVDIDTIR-------GLNKPNATR 238
                ||   :|.:...:|:||.|.:..::.:.:..  .|..|.....:.       .||..:..|
plant   182 RDHLKD---LLQNMEVRLKPLMDHINRIKDLPVPS--FESFPAWETRVAKAARENGDLNPDDTLR 241

  Fly   239 PDGMAWSGEATRNQGFAVEETRVDVTIG-------GDDTSDAVIERKSRPIWMTE---------- 286
            |.|    |..:....| :.||.::|.:|       .|:..|: ..||..|.|:.:          
plant   242 PQG----GYGSTPMPF-LGETEIEVNLGEENEDVKSDEVGDS-SRRKLTPSWLIKKGMNLSDEQR 300

  Fly   287 STVITDTDAADGAADAVQTASGSGHRNRKE-----------NEDIMSVLLQHEKQPGQKEPHMKG 340
            ..:..:..|.||.:   ...:|...||.|:           .|..::..|..::..|:....::.
plant   301 GEIRHEAKADDGGS---SMENGDDDRNLKDEYLKAYYAAILEEQELAEKLNQQESAGKVTTDIEL 362

  Fly   341 MRVGSSNANSSDSSDDEKDIENSKIP---DVDFDNYINSDSAEEDDD 384
            ....|.......|..:|::.|.:.:.   :...|..:.::.||:|::
plant   363 ATSSSDRQVGMKSKREEEEEEEASVAANGNYKVDLNVEAEEAEQDEN 409

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
TfIIEalphaNP_524026.1 TFIIE 43..188 CDD:128804 38/177 (21%)
TFIIE-A_C 357..429 CDD:463287 6/31 (19%)
AT4G20810NP_193813.1 TFIIE 30..171 CDD:128804 34/154 (22%)

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