DRSC/TRiP Functional Genomics Resources

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Protein Alignment TfIIEalpha and tfa1

DIOPT Version :10

Sequence 1:NP_524026.1 Gene:TfIIEalpha / 39313 FlyBaseID:FBgn0015828 Length:429 Species:Drosophila melanogaster
Sequence 2:NP_594701.3 Gene:tfa1 / 2543627 PomBaseID:SPAC458.07 Length:434 Species:Schizosaccharomyces pombe


Alignment Length:436 Identity:91/436 - (20%)
Similarity:179/436 - (41%) Gaps:109/436 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly    21 VTEVPSSLKQLARLVVRGFYSLEDALIIDMLVRNPCMKEDDIGELLRFEKKQLRARITTLRTDKF 85
            ::..|..:::|.::::|.||.....:.:|.::|:..:.::....|:....|:.|.....||.|:.
pombe     1 MSNAPEIVQRLIKMIMRAFYETRHIIFMDAILRHSALTDEQTALLMGIPIKECRFIAGKLREDRL 65

  Fly    86 --IQIRLKMETGPDGKAQKVNYYFINYKTFVNVVKYKLDLMRKRMETEERDATSRASFKCSSCSK 148
              ||.|.:|:.|.. :.....|::|::.:.::.:|:::..:.|.:|...|:......:.|..|:|
pombe    66 LAIQSRTEMKEGQQ-RQYHTTYFYIDFCSTIDSIKWRMHQLVKTVEDRMRNDFDSKGYVCPFCNK 129

  Fly   149 TFTDLEADQLFDMATLE--FRCTFCGSSVEEDSAAMPKKDSRLMLAHFNEQLQPLYDLLREVEGI 211
            .|:.|:   :..:.|.|  |.|..||:.:::|..:.....|:..|.....|:..:.|.|:.|:  
pombe   130 KFSSLD---VLSLVTNEGTFACNVCGTELKDDEESAEMMSSQKRLGKLMGQVNGIIDALKRVD-- 189

  Fly   212 KLAPEVLEPE-----------PVDIDTIRGLNKPNATRPDGMAWSGEATRNQGFAVEETRVDVTI 265
                |::.|:           ||.:|| :.|::.|.::      |....|   .:.....:.|..
pombe   190 ----EIVVPQNNFQSALEHAVPVSLDT-QNLSQQNLSK------SNSDVR---LSTSSPSITVDF 240

  Fly   266 GGDDTSDAVIERKSR-------------PIWMTESTV---ITDTDAADGAADAVQTASGSGHRNR 314
            ..|..:|   |::.|             |.|...||:   ||...|.|.|..:.:|.:.:..::.
pombe   241 SADKETD---EKRERNCDKQVKAAQNILPEWHATSTISGSITRAGAKDAALHSFRTETVNEVQDT 302

  Fly   315 KENEDIMSVLLQHEK----------QPGQKEPHMKGMRVGSSNANSSDSSDDEKD---------- 359
            |  .||.|     ||          :..|||         .|....|::.|||:|          
pombe   303 K--TDITS-----EKSALDAYYATLRAKQKE---------ESEFMDSENVDDEEDDDFLDVTTAT 351

  Fly   360 -IENSKIPDVDFDNY------INSD---------SAEEDDDVPTVL 389
             ::|.   ..|:.:.      :|||         |.||::.:|.::
pombe   352 SLQNK---STDYGSVKRKTENLNSDSDIQNKRTKSIEENNSLPPIV 394

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
TfIIEalphaNP_524026.1 TFIIE 43..188 CDD:128804 31/148 (21%)
TFIIE-A_C 357..429 CDD:463287 11/59 (19%)
tfa1NP_594701.3 TFIIE 24..162 CDD:128804 31/141 (22%)

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