DRSC/TRiP Functional Genomics Resources

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Protein Alignment TfIIEalpha and gtf-2E1

DIOPT Version :9

Sequence 1:NP_524026.1 Gene:TfIIEalpha / 39313 FlyBaseID:FBgn0015828 Length:429 Species:Drosophila melanogaster
Sequence 2:NP_503060.1 Gene:gtf-2E1 / 178502 WormBaseID:WBGene00013998 Length:433 Species:Caenorhabditis elegans


Alignment Length:455 Identity:116/455 - (25%)
Similarity:220/455 - (48%) Gaps:59/455 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 STSTAAANAAPAKTEVRYVTEVPSSLKQLARLVVRGFYSLEDALIIDMLVRNPCMKEDDIGELLR 67
            |:..|.:.::.|.||.:.|.|:|.:|..:..:||:.|:|.|..:|:..::|..|::|:::...::
 Worm     2 SSGPATSGSSSAHTETQVVDEIPEALNTILLMVVKNFFSSEHFIIVYHIMRAQCIREENLKARIQ 66

  Fly    68 FEKKQLRARITTLRTDKFIQIRLKMETGPDGKAQKVNYYFINYKTFVNVVKYKLDLMRKRMETEE 132
            |::|.||..:.:|:.:|.::.|...:...:.:...:.:|:|||:..:|||:||:|.||:::|:.|
 Worm    67 FDQKMLRQLLASLKAEKLVKERTITQKNENNRTVSIIFYYINYRAVLNVVRYKIDHMRQKLESRE 131

  Fly   133 RDATSRASFKCSSCSKTFTDLEADQLFDMATLEFRCTFCGSSVEEDSAAMPKKDSRLMLAHFNEQ 197
            :..|:||.::|.:|..::..||.:::.|..:....|..|...|..|...:|.:.:|..:|.||||
 Worm   132 QMDTNRAHYRCGACQSSYDMLEINRILDAESGRLICWRCHGDVLADETVVPSRTTRTAVARFNEQ 196

  Fly   198 LQPLYDLLREVEGIKLAPEVLEP--------------EPVDIDTIRGLNKPNATRPDGMAWSGEA 248
            :.||:..:..:.||:|||.:|||              :...:|...|.......:..|:|.|.:.
 Worm   197 MTPLFSHICALNGIQLAPHLLEPDITKYLEDDKELQLQQQQMDFTSGGGGGGRIQLGGVAHSYQN 261

  Fly   249 TRNQGFAVEETRVDVTIGGDDTSDAVIERKSRPIWMTESTVITDTDAADGAADAVQTASGSGHRN 313
            ..:..:...:. |.|.:..|.....|.|.|..|.|:.::.:                  |.|..:
 Worm   262 IASINYQNGDA-VFVDLNADINKGPVEEAKIMPEWLKDNAI------------------GGGEAS 307

  Fly   314 RKENEDIMSVLLQHEKQPGQKEPHMKGMRVGSS-------NANSSDSSDDEKDIENSKIPDVDFD 371
            ..|:     ||.|.:.:  ::|...|..|.|.|       ..:|.:|:.:.| ||......:..:
 Worm   308 HNEH-----VLDQAKTE--EEETSTKQRRYGPSLDYLKEIECSSEESAPNVK-IEEPPAKQIKME 364

  Fly   372 -------NYINSDSAEEDDDVPTVLVAGRPHPLDQLDDNLIA-QMTPQEKENYIHVYQQHYSHIF 428
                   ..:::|.:||:|   .:.||||..||.|:...::. :|:..|||:|..|.|..::..|
 Worm   365 VDEEAIKMEVDNDESEEED---LIHVAGRALPLSQITPRMVENEMSELEKESYCSVVQDLFAMFF 426

  Fly   429  428
             Worm   427  426

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
TfIIEalphaNP_524026.1 HTH 30..137 CDD:304362 30/106 (28%)
TFIIE 43..188 CDD:128804 39/144 (27%)
TFIIE-A_C 357..429 CDD:288386 22/80 (28%)
gtf-2E1NP_503060.1 TFIIE 41..188 CDD:128804 39/146 (27%)
TFIIE-A_C 354..426 CDD:371578 19/74 (26%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C160161028
Domainoid 1 1.000 75 1.000 Domainoid score I5892
eggNOG 1 0.900 - - E1_COG1675
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H38062
Inparanoid 1 1.050 168 1.000 Inparanoid score I2774
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG52052
OrthoDB 1 1.010 - - D1343016at2759
OrthoFinder 1 1.000 - - FOG0003249
OrthoInspector 1 1.000 - - oto20157
orthoMCL 1 0.900 - - OOG6_104238
Panther 1 1.100 - - LDO PTHR13097
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R1464
SonicParanoid 1 1.000 - - X4875
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
1514.840

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