DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG32085 and RAD7

DIOPT Version :9

Sequence 1:NP_729732.1 Gene:CG32085 / 39311 FlyBaseID:FBgn0052085 Length:666 Species:Drosophila melanogaster
Sequence 2:NP_012586.1 Gene:RAD7 / 853512 SGDID:S000003813 Length:565 Species:Saccharomyces cerevisiae


Alignment Length:322 Identity:73/322 - (22%)
Similarity:118/322 - (36%) Gaps:88/322 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly   400 LLDHLQSLF------ELELAGCNEVTEAG--LWACLTPRIVSLSLADCINIADEAVGAVAQLLPS 456
            |.||...||      .|..:.|::::..|  ..|..:|.:..|||..|..:..|::..:|:.||:
Yeast   223 LNDHTLQLFLKTDLKRLTFSDCSKISFDGYKTLAIFSPHLTELSLQMCGQLNHESLLYIAEKLPN 287

  Fly   457 LYEFS----------------------LQAYHV------TDAALG-------------------- 473
            |...:                      |:.:|:      ||.:|.                    
Yeast   288 LKSLNLDGPFLINEDTWEKFFVIMKGRLEEFHISNTHRFTDKSLSNLLINCGSTLVSLGLSRLDS 352

  Fly   474 ---------YFSPKQSHSLSILRLQSCWELTNHGIVNIVHSLPH-LTVLSLSGCSKLTD----DG 524
                     |....:.|||.|....:..::.:..|:|::..:.. |..|.|:||..|||    :|
Yeast   353 ISNYALLPQYLVNDEFHSLCIEYPFNEEDVNDEIIINLLGQIGRTLRKLVLNGCIDLTDSMIING 417

  Fly   525 VELIAENLQKLRALDLSWCPRITDASLEYI--ACDLNQLEELTLDRCVHITDIGVGYISTMLSLT 587
            :.........|..|.|....:||..||.|.  ..:||.|.|.:..||:.:.|:.:  |..:|:..
Yeast   418 LTAFIPEKCPLEVLSLEESDQITTDSLSYFFSKVELNNLIECSFRRCLQLGDMAI--IELLLNGA 480

  Fly   588 ALFLRWCSQVRDFGLQHLCSMRNLQVLSLAGCPLLTSSGL-------SSLIQLRHLQELELT 642
            .      ..:|...|..|..:.....::|| ||.||...|       .|:||:...|...||
Yeast   481 R------DSLRSLNLNSLKELTKEAFVALA-CPNLTYLDLGFVRCVDDSVIQMLGEQNPNLT 535

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG32085NP_729732.1 leucine-rich repeat 382..406 CDD:275381 3/5 (60%)
AMN1 383..600 CDD:187754 58/271 (21%)
leucine-rich repeat 431..456 CDD:275381 7/24 (29%)
leucine-rich repeat 457..482 CDD:275381 7/81 (9%)
leucine-rich repeat 483..508 CDD:275381 4/24 (17%)
leucine-rich repeat 509..534 CDD:275381 9/28 (32%)
leucine-rich repeat 535..560 CDD:275381 9/26 (35%)
leucine-rich repeat 561..585 CDD:275381 6/23 (26%)
leucine-rich repeat 586..610 CDD:275381 3/23 (13%)
leucine-rich repeat 636..661 CDD:275381 3/7 (43%)
RAD7NP_012586.1 AMN1 228..440 CDD:187754 40/211 (19%)
leucine-rich repeat 236..261 CDD:275381 4/24 (17%)
leucine-rich repeat 262..287 CDD:275381 7/24 (29%)
leucine-rich repeat 288..340 CDD:275381 6/51 (12%)
leucine-rich repeat 342..365 CDD:275381 1/22 (5%)
leucine-rich repeat 368..397 CDD:275381 6/28 (21%)
leucine-rich repeat 398..426 CDD:275381 9/27 (33%)
leucine-rich repeat 428..455 CDD:275381 9/26 (35%)
leucine-rich repeat 456..475 CDD:275381 6/20 (30%)
leucine-rich repeat 484..507 CDD:275381 6/23 (26%)
leucine-rich repeat 508..533 CDD:275381 7/24 (29%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1947
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 62 1.000 Inparanoid score I1756
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.950

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